Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SLX4Q8IY92 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SLX4Q8IY92 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLX4Q8IY92 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SLX4Q8IY92 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLX4Q8IY92 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLX4Q8IY92 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.49■■□□□ 1.67
SLX4Q8IY92 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SLX4Q8IY92 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC25.49■■□□□ 1.67
SLX4Q8IY92 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25.49■■□□□ 1.67
SLX4Q8IY92 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SLX4Q8IY92 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.49■■□□□ 1.67
SLX4Q8IY92 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLX4Q8IY92 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLX4Q8IY92 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLX4Q8IY92 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
SLX4Q8IY92 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.49■■□□□ 1.67
SLX4Q8IY92 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLX4Q8IY92 KRASP1-201ENST00000407852 552 ntBASIC25.49■■□□□ 1.67
SLX4Q8IY92 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.49■■□□□ 1.67
SLX4Q8IY92 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.49■■□□□ 1.67
SLX4Q8IY92 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.49■■□□□ 1.67
SLX4Q8IY92 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.49■■□□□ 1.67
SLX4Q8IY92 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
SLX4Q8IY92 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.49■■□□□ 1.67
SLX4Q8IY92 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC25.48■■□□□ 1.67
SLX4Q8IY92 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLX4Q8IY92 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
SLX4Q8IY92 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC25.48■■□□□ 1.67
SLX4Q8IY92 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.48■■□□□ 1.67
SLX4Q8IY92 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
SLX4Q8IY92 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLX4Q8IY92 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLX4Q8IY92 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLX4Q8IY92 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLX4Q8IY92 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLX4Q8IY92 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLX4Q8IY92 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLX4Q8IY92 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.47■■□□□ 1.67
SLX4Q8IY92 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLX4Q8IY92 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
SLX4Q8IY92 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SLX4Q8IY92 RN7SL850P-201ENST00000579959 291 ntBASIC25.47■■□□□ 1.67
SLX4Q8IY92 MIR4785-201ENST00000585005 73 ntBASIC25.47■■□□□ 1.67
SLX4Q8IY92 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.47■■□□□ 1.67
SLX4Q8IY92 AL445228.2-201ENST00000605589 952 ntBASIC25.47■■□□□ 1.67
SLX4Q8IY92 AC097493.4-201ENST00000641197 219 ntBASIC25.47■■□□□ 1.67
SLX4Q8IY92 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.47■■□□□ 1.67
SLX4Q8IY92 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.47■■□□□ 1.67
SLX4Q8IY92 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SLX4Q8IY92 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLX4Q8IY92 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC25.47■■□□□ 1.67
SLX4Q8IY92 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.47■■□□□ 1.67
SLX4Q8IY92 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SLX4Q8IY92 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.46■■□□□ 1.67
SLX4Q8IY92 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLX4Q8IY92 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SLX4Q8IY92 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC25.46■■□□□ 1.67
SLX4Q8IY92 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLX4Q8IY92 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
SLX4Q8IY92 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.46■■□□□ 1.67
SLX4Q8IY92 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
SLX4Q8IY92 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.46■■□□□ 1.67
SLX4Q8IY92 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
SLX4Q8IY92 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.46■■□□□ 1.67
SLX4Q8IY92 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.46■■□□□ 1.67
SLX4Q8IY92 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
SLX4Q8IY92 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
SLX4Q8IY92 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
SLX4Q8IY92 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
SLX4Q8IY92 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
SLX4Q8IY92 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC25.45■■□□□ 1.66
SLX4Q8IY92 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC25.45■■□□□ 1.66
SLX4Q8IY92 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
SLX4Q8IY92 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SLX4Q8IY92 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC25.45■■□□□ 1.66
SLX4Q8IY92 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
SLX4Q8IY92 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SLX4Q8IY92 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SLX4Q8IY92 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SLX4Q8IY92 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SLX4Q8IY92 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.45■■□□□ 1.66
SLX4Q8IY92 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
SLX4Q8IY92 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SLX4Q8IY92 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC25.44■■□□□ 1.66
SLX4Q8IY92 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SLX4Q8IY92 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.44■■□□□ 1.66
SLX4Q8IY92 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLX4Q8IY92 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.44■■□□□ 1.66
SLX4Q8IY92 AC110285.5-201ENST00000611501 352 ntBASIC25.44■■□□□ 1.66
SLX4Q8IY92 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.44■■□□□ 1.66
SLX4Q8IY92 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.44■■□□□ 1.66
SLX4Q8IY92 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.44■■□□□ 1.66
SLX4Q8IY92 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.44■■□□□ 1.66
SLX4Q8IY92 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLX4Q8IY92 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.44■■□□□ 1.66
SLX4Q8IY92 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLX4Q8IY92 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
SLX4Q8IY92 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SLX4Q8IY92 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms