Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM48Q8IWZ4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM48Q8IWZ4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRIM48Q8IWZ4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TRIM48Q8IWZ4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM48Q8IWZ4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM48Q8IWZ4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM48Q8IWZ4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM48Q8IWZ4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM48Q8IWZ4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM48Q8IWZ4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRIM48Q8IWZ4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM48Q8IWZ4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM48Q8IWZ4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM48Q8IWZ4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 GUSBP6-202ENST00000438529 1198 ntBASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM48Q8IWZ4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 FBXW4P1-201ENST00000426721 2239 ntBASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 AC091799.1-201ENST00000422823 811 ntBASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 AC093787.1-201ENST00000450396 207 ntBASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 RARRES2P4-201ENST00000514074 484 ntBASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRIM48Q8IWZ4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 AL512625.2-201ENST00000417533 625 ntBASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 AL138781.1-201ENST00000566567 1274 ntBASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 AC142086.2-201ENST00000569753 217 ntBASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM48Q8IWZ4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms