Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.94■□□□□ 0.464e-6■■■□□ 17.7
LARP4Q71RC2 EXD3-212ENST00000491734 2176 ntTSL 1 (best)17.88■□□□□ 0.454e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-220ENST00000493534 896 ntTSL 317.83■□□□□ 0.444e-6■■■□□ 17.7
LARP4Q71RC2 PNPLA2-202ENST00000525250 2726 ntTSL 217.83■□□□□ 0.443e-7■■■□□ 17.7
LARP4Q71RC2 EXD3-202ENST00000460390 1432 ntTSL 217.77■□□□□ 0.444e-6■■■□□ 17.7
LARP4Q71RC2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.66■□□□□ 0.424e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-219ENST00000490853 704 ntTSL 317.62■□□□□ 0.414e-6■■■□□ 17.7
LARP4Q71RC2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.414e-6■■■□□ 17.7
LARP4Q71RC2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.412e-6■■■□□ 17.7
LARP4Q71RC2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.53■□□□□ 0.42e-6■■■□□ 17.7
LARP4Q71RC2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.44e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-239ENST00000531019 549 ntTSL 417.52■□□□□ 0.44e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-230ENST00000526332 579 ntTSL 417.52■□□□□ 0.44e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-224ENST00000498476 554 ntTSL 417.52■□□□□ 0.44e-6■■■□□ 17.7
LARP4Q71RC2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.46■□□□□ 0.394e-6■■■□□ 17.7
LARP4Q71RC2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.31■□□□□ 0.364e-6■■■□□ 17.7
LARP4Q71RC2 EXD3-211ENST00000490886 1123 ntTSL 517.3■□□□□ 0.364e-6■■■□□ 17.7
LARP4Q71RC2 MIIP-203ENST00000466860 1709 ntTSL 517.3■□□□□ 0.364e-6■■■□□ 17.7
LARP4Q71RC2 PLCL1-202ENST00000435320 6665 ntTSL 217.26■□□□□ 0.351e-6■■■□□ 17.7
LARP4Q71RC2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.344e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-210ENST00000547555 1658 ntTSL 517.01■□□□□ 0.314e-6■■■□□ 17.7
LARP4Q71RC2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.274e-6■■■□□ 17.7
LARP4Q71RC2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.274e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-218ENST00000488042 1134 ntTSL 216.7■□□□□ 0.264e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-220ENST00000549686 563 ntTSL 216.69■□□□□ 0.264e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-215ENST00000470679 584 ntTSL 516.59■□□□□ 0.254e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-243ENST00000532772 1618 ntTSL 516.57■□□□□ 0.244e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-207ENST00000434694 1056 ntTSL 516.49■□□□□ 0.234e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-237ENST00000530031 800 ntTSL 516.47■□□□□ 0.234e-6■■■□□ 17.7
LARP4Q71RC2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.234e-6■■■□□ 17.7
LARP4Q71RC2 PNPLA2-204ENST00000529255 1301 ntTSL 1 (best)16.41■□□□□ 0.223e-7■■■□□ 17.7
LARP4Q71RC2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.39■□□□□ 0.214e-6■■■□□ 17.7
LARP4Q71RC2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.32■□□□□ 0.24e-6■■■□□ 17.7
LARP4Q71RC2 TMC6-220ENST00000591756 475 ntTSL 216.31■□□□□ 0.24e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.19■□□□□ 0.184e-6■■■□□ 17.7
LARP4Q71RC2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.08■□□□□ 0.164e-6■■■□□ 17.7
LARP4Q71RC2 GADD45B-206ENST00000592937 2007 ntTSL 216.04■□□□□ 0.164e-6■■■□□ 17.7
LARP4Q71RC2 MIIP-207ENST00000498685 1392 ntTSL 216.01■□□□□ 0.154e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-201ENST00000323275 2450 ntTSL 1 (best)16■□□□□ 0.154e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-210ENST00000458452 2571 ntTSL 215.82■□□□□ 0.124e-6■■■□□ 17.7
LARP4Q71RC2 LINC01138-207ENST00000638958 1395 ntTSL 515.8■□□□□ 0.124e-6■■■□□ 17.7
LARP4Q71RC2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.114e-6■■■□□ 17.7
LARP4Q71RC2 PRKRIP1-206ENST00000482465 2257 ntTSL 215.66■□□□□ 0.14e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-233ENST00000527098 2004 ntTSL 215.52■□□□□ 0.084e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-232ENST00000526904 551 ntTSL 415.29■□□□□ 0.044e-6■■■□□ 17.7
LARP4Q71RC2 RBBP7-209ENST00000468092 630 ntTSL 515.22■□□□□ 0.034e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.92□□□□□ -0.024e-6■■■□□ 17.7
LARP4Q71RC2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.024e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.78□□□□□ -0.044e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-202ENST00000380135 1566 ntTSL 314.73□□□□□ -0.054e-6■■■□□ 17.7
LARP4Q71RC2 MIIP-204ENST00000478299 595 ntTSL 214.69□□□□□ -0.064e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-209ENST00000547318 2001 ntTSL 1 (best)14.66□□□□□ -0.064e-6■■■□□ 17.7
LARP4Q71RC2 MIIP-202ENST00000460823 955 ntTSL 514.65□□□□□ -0.064e-6■■■□□ 17.7
LARP4Q71RC2 EXD3-206ENST00000478344 2932 ntTSL 214.64□□□□□ -0.074e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-236ENST00000528879 1524 ntTSL 514.42□□□□□ -0.14e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-212ENST00000547877 2020 ntTSL 514.32□□□□□ -0.124e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.31□□□□□ -0.124e-6■■■□□ 17.7
LARP4Q71RC2 STAG3L5P-PVRIG2P-PILRB-202ENST00000444874 2661 ntTSL 214.3□□□□□ -0.124e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.28□□□□□ -0.124e-6■■■□□ 17.7
LARP4Q71RC2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.124e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.27□□□□□ -0.134e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.144e-6■■■□□ 17.7
LARP4Q71RC2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.174e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-226ENST00000525285 579 ntTSL 413.95□□□□□ -0.184e-6■■■□□ 17.7
LARP4Q71RC2 ZNF621-207ENST00000490457 916 ntTSL 313.86□□□□□ -0.194e-6■■■□□ 17.7
LARP4Q71RC2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.53□□□□□ -0.244e-6■■■□□ 17.7
LARP4Q71RC2 RPS6KA3-202ENST00000438357 530 ntTSL 513.51□□□□□ -0.254e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-206ENST00000430786 849 ntTSL 513.44□□□□□ -0.264e-6■■■□□ 17.7
LARP4Q71RC2 SLTM-206ENST00000480144 2277 ntTSL 213.33□□□□□ -0.284e-6■■■□□ 17.7
LARP4Q71RC2 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.284e-6■■■□□ 17.7
LARP4Q71RC2 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.284e-6■■■□□ 17.7
LARP4Q71RC2 SIL1-204ENST00000503732 690 ntTSL 313.21□□□□□ -0.294e-6■■■□□ 17.7
LARP4Q71RC2 NCOR2-215ENST00000458234 4675 ntAPPRIS ALT2 TSL 1 (best)13.21□□□□□ -0.34e-6■■■□□ 17.7
LARP4Q71RC2 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.324e-6■■■□□ 17.7
LARP4Q71RC2 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.344e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-229ENST00000526113 591 ntTSL 512.84□□□□□ -0.354e-6■■■□□ 17.7
LARP4Q71RC2 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.364e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-244ENST00000532952 773 ntTSL 312.76□□□□□ -0.374e-6■■■□□ 17.7
LARP4Q71RC2 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC12.7□□□□□ -0.384e-6■■■□□ 17.7
LARP4Q71RC2 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC12.58□□□□□ -0.44e-6■■■□□ 17.7
LARP4Q71RC2 CCDC136-205ENST00000464672 1870 ntAPPRIS ALT2 TSL 212.39□□□□□ -0.434e-6■■■□□ 17.7
LARP4Q71RC2 PPP2R2A-223ENST00000524169 784 ntTSL 312.28□□□□□ -0.444e-6■■■□□ 17.7
LARP4Q71RC2 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC12.18□□□□□ -0.464e-6■■■□□ 17.7
LARP4Q71RC2 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.484e-6■■■□□ 17.7
LARP4Q71RC2 SPTB-206ENST00000553938 3456 ntTSL 1 (best)12.06□□□□□ -0.484e-6■■■□□ 17.7
LARP4Q71RC2 THAP9-AS1-202ENST00000504520 2770 ntTSL 1 (best) BASIC12.05□□□□□ -0.484e-6■■■□□ 17.7
LARP4Q71RC2 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.514e-6■■■□□ 17.7
LARP4Q71RC2 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC11.86□□□□□ -0.514e-6■■■□□ 17.7
LARP4Q71RC2 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.534e-6■■■□□ 17.7
LARP4Q71RC2 SMAD5-209ENST00000514777 588 ntTSL 311.71□□□□□ -0.534e-6■■■□□ 17.7
LARP4Q71RC2 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.574e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-246ENST00000534345 485 ntTSL 411.47□□□□□ -0.574e-6■■■□□ 17.7
LARP4Q71RC2 SLTM-212ENST00000557924 3021 ntTSL 211.46□□□□□ -0.574e-6■■■□□ 17.7
LARP4Q71RC2 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.584e-6■■■□□ 17.7
LARP4Q71RC2 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.584e-6■■■□□ 17.7
LARP4Q71RC2 TMC6-217ENST00000590934 386 ntTSL 511.39□□□□□ -0.594e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-231ENST00000551931 705 ntTSL 311.35□□□□□ -0.594e-6■■■□□ 17.7
LARP4Q71RC2 LETMD1-222ENST00000550274 809 ntTSL 211.35□□□□□ -0.594e-6■■■□□ 17.7
LARP4Q71RC2 CCDC136-215ENST00000528772 565 ntTSL 411.1□□□□□ -0.634e-6■■■□□ 17.7
LARP4Q71RC2 MYDGF-204ENST00000599761 463 ntTSL 311.04□□□□□ -0.645e-9■■■□□ 17.7
Retrieved 100 of 15,922 protein–RNA pairs in 391.6 ms