Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 AC124016.1-201ENST00000609552 612 ntBASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CNKSR3Q6P9H4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 TSPY7P-201ENST00000431358 1114 ntBASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 AL023875.1-201ENST00000640777 796 ntBASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CNKSR3Q6P9H4 FAM99A-202ENST00000538190 1989 ntBASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 AP001412.1-201ENST00000608405 714 ntBASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CNKSR3Q6P9H4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 AC087633.2-202ENST00000565166 1439 ntBASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 AC239809.2-201ENST00000415381 517 ntBASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 AC120498.8-201ENST00000614275 531 ntBASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 AL049637.2-201ENST00000641778 930 ntBASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CNKSR3Q6P9H4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CNKSR3Q6P9H4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CNKSR3Q6P9H4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CNKSR3Q6P9H4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CNKSR3Q6P9H4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CNKSR3Q6P9H4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CNKSR3Q6P9H4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CNKSR3Q6P9H4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.39■■□□□ 1.17
CNKSR3Q6P9H4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
CNKSR3Q6P9H4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.39■■□□□ 1.17
CNKSR3Q6P9H4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CNKSR3Q6P9H4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.39■■□□□ 1.17
CNKSR3Q6P9H4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.39■■□□□ 1.17
CNKSR3Q6P9H4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.39■■□□□ 1.17
CNKSR3Q6P9H4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CNKSR3Q6P9H4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
CNKSR3Q6P9H4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CNKSR3Q6P9H4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CNKSR3Q6P9H4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms