Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF43Q68DV7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
RNF43Q68DV7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF43Q68DV7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
RNF43Q68DV7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF43Q68DV7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF43Q68DV7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF43Q68DV7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF43Q68DV7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF43Q68DV7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF43Q68DV7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF43Q68DV7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF43Q68DV7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF43Q68DV7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF43Q68DV7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF43Q68DV7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF43Q68DV7 MIR4651-201ENST00000582622 73 ntBASIC21.63■■□□□ 1.05
RNF43Q68DV7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RNF43Q68DV7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF43Q68DV7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF43Q68DV7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF43Q68DV7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RNF43Q68DV7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF43Q68DV7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF43Q68DV7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
RNF43Q68DV7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF43Q68DV7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF43Q68DV7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF43Q68DV7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF43Q68DV7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF43Q68DV7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF43Q68DV7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.62■■□□□ 1.05
RNF43Q68DV7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF43Q68DV7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF43Q68DV7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF43Q68DV7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RNF43Q68DV7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.62■■□□□ 1.05
RNF43Q68DV7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.62■■□□□ 1.05
RNF43Q68DV7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.62■■□□□ 1.05
RNF43Q68DV7 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.62■■□□□ 1.05
RNF43Q68DV7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF43Q68DV7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
RNF43Q68DV7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF43Q68DV7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF43Q68DV7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF43Q68DV7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
RNF43Q68DV7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF43Q68DV7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF43Q68DV7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF43Q68DV7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.61■■□□□ 1.05
RNF43Q68DV7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF43Q68DV7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF43Q68DV7 AC007322.1-201ENST00000426983 750 ntBASIC21.61■■□□□ 1.05
RNF43Q68DV7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
RNF43Q68DV7 TERF1P5-201ENST00000477545 1207 ntBASIC21.61■■□□□ 1.05
RNF43Q68DV7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.61■■□□□ 1.05
RNF43Q68DV7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF43Q68DV7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF43Q68DV7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF43Q68DV7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF43Q68DV7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF43Q68DV7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF43Q68DV7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF43Q68DV7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
RNF43Q68DV7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.6■■□□□ 1.05
RNF43Q68DV7 AL157384.1-201ENST00000445995 2473 ntBASIC21.6■■□□□ 1.05
RNF43Q68DV7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF43Q68DV7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF43Q68DV7 SLC29A4P1-201ENST00000398760 971 ntBASIC21.6■■□□□ 1.05
RNF43Q68DV7 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.6■■□□□ 1.05
RNF43Q68DV7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF43Q68DV7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF43Q68DV7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.6■■□□□ 1.05
RNF43Q68DV7 AC013268.1-206ENST00000638368 961 ntBASIC21.6■■□□□ 1.05
RNF43Q68DV7 AC112229.1-201ENST00000639295 961 ntBASIC21.6■■□□□ 1.05
RNF43Q68DV7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF43Q68DV7 AC061975.6-201ENST00000579045 1553 ntBASIC21.6■■□□□ 1.05
RNF43Q68DV7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF43Q68DV7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF43Q68DV7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RNF43Q68DV7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF43Q68DV7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
RNF43Q68DV7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF43Q68DV7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RNF43Q68DV7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.59■■□□□ 1.05
RNF43Q68DV7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF43Q68DV7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF43Q68DV7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF43Q68DV7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.59■■□□□ 1.05
RNF43Q68DV7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF43Q68DV7 AC243732.1-201ENST00000612648 864 ntBASIC21.59■■□□□ 1.05
RNF43Q68DV7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.59■■□□□ 1.05
RNF43Q68DV7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.59■■□□□ 1.05
RNF43Q68DV7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms