Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 DNF3YMR162C 4971 nt1.57□□□□□ -2.16
RFU1Q08003 UBP1YDL122W 2430 nt1.57□□□□□ -2.16
RFU1Q08003 YMR31YFR049W 372 nt1.56□□□□□ -2.16
RFU1Q08003 YIL102C-AYIL102C-A 228 nt1.56□□□□□ -2.16
RFU1Q08003 HRT3YLR097C 1035 nt1.56□□□□□ -2.16
RFU1Q08003 YMR272W-BYMR272W-B 108 nt1.56□□□□□ -2.16
RFU1Q08003 GCY1YOR120W 939 nt1.56□□□□□ -2.16
RFU1Q08003 SAS4YDR181C 1446 nt1.56□□□□□ -2.16
RFU1Q08003 NPR1YNL183C 2373 nt1.56□□□□□ -2.16
RFU1Q08003 RTP1YMR185W 2946 nt1.55□□□□□ -2.16
RFU1Q08003 VPS16YPL045W 2397 nt1.55□□□□□ -2.16
RFU1Q08003 YOR093CYOR093C 4947 nt1.55□□□□□ -2.16
RFU1Q08003 CBS2YDR197W 1170 nt1.55□□□□□ -2.16
RFU1Q08003 DIG2YDR480W 972 nt1.55□□□□□ -2.16
RFU1Q08003 MMS21YEL019C 804 nt1.55□□□□□ -2.16
RFU1Q08003 ISC10YER180C 804 nt1.55□□□□□ -2.16
RFU1Q08003 YKL131WYKL131W 522 nt1.55□□□□□ -2.16
RFU1Q08003 MRPL17YNL252C 846 nt1.55□□□□□ -2.16
RFU1Q08003 NGL1YOL042W 1092 nt1.55□□□□□ -2.16
RFU1Q08003 PEX8YGR077C 1770 nt1.54□□□□□ -2.16
RFU1Q08003 IRC20YLR247C 4671 nt1.54□□□□□ -2.16
RFU1Q08003 SOK2YMR016C 2358 nt1.54□□□□□ -2.16
RFU1Q08003 snR57snR57 88 nt1.54□□□□□ -2.16
RFU1Q08003 UBC5YDR059C 447 nt1.54□□□□□ -2.16
RFU1Q08003 CPR5YDR304C 678 nt1.54□□□□□ -2.16
RFU1Q08003 YAL034C-BYAL034C-B 354 nt1.54□□□□□ -2.16
RFU1Q08003 RPL6BYLR448W 531 nt1.54□□□□□ -2.16
RFU1Q08003 MFB1YDR219C 1398 nt1.54□□□□□ -2.16
RFU1Q08003 MET18YIL128W 3099 nt1.54□□□□□ -2.16
RFU1Q08003 SBE22YHR103W 2559 nt1.53□□□□□ -2.16
RFU1Q08003 YHL044WYHL044W 708 nt1.53□□□□□ -2.16
RFU1Q08003 JJJ2YJL162C 1752 nt1.53□□□□□ -2.16
RFU1Q08003 IRC10YOL015W 1761 nt1.53□□□□□ -2.16
RFU1Q08003 HRT1YOL133W 366 nt1.53□□□□□ -2.16
RFU1Q08003 HUA2YOR284W 732 nt1.53□□□□□ -2.16
RFU1Q08003 RLF2YPR018W 1821 nt1.53□□□□□ -2.16
RFU1Q08003 ADR1YDR216W 3972 nt1.53□□□□□ -2.17
RFU1Q08003 MEC1YBR136W 7107 nt1.53□□□□□ -2.17
RFU1Q08003 UBP16YPL072W 1500 nt1.52□□□□□ -2.17
RFU1Q08003 SHR3YDL212W 633 nt1.52□□□□□ -2.17
RFU1Q08003 NSE3YDR288W 912 nt1.52□□□□□ -2.17
RFU1Q08003 YER189WYER189W 369 nt1.52□□□□□ -2.17
RFU1Q08003 YHR052W-AYHR052W-A 195 nt1.52□□□□□ -2.17
RFU1Q08003 YHR054W-AYHR054W-A 195 nt1.52□□□□□ -2.17
RFU1Q08003 TEX1YNL253W 1269 nt1.52□□□□□ -2.17
RFU1Q08003 YPR014CYPR014C 330 nt1.52□□□□□ -2.17
RFU1Q08003 snR191snR191 274 nt1.52□□□□□ -2.17
RFU1Q08003 snR35snR35 204 nt1.52□□□□□ -2.17
RFU1Q08003 PRP6YBR055C 2700 nt1.52□□□□□ -2.17
RFU1Q08003 SRP1YNL189W 1629 nt1.51□□□□□ -2.17
RFU1Q08003 TDA9YML081W 3756 nt1.51□□□□□ -2.17
RFU1Q08003 YDR018CYDR018C 1191 nt1.51□□□□□ -2.17
RFU1Q08003 DPP1YDR284C 870 nt1.51□□□□□ -2.17
RFU1Q08003 MFA1YDR461W 111 nt1.51□□□□□ -2.17
RFU1Q08003 DDI2YFL061W 678 nt1.51□□□□□ -2.17
RFU1Q08003 YGL006W-AYGL006W-A 111 nt1.51□□□□□ -2.17
RFU1Q08003 YIL046W-AYIL046W-A 165 nt1.51□□□□□ -2.17
RFU1Q08003 YKR075W-AYKR075W-A 270 nt1.51□□□□□ -2.17
RFU1Q08003 CCW14YLR390W-A 717 nt1.51□□□□□ -2.17
RFU1Q08003 YML094C-AYML094C-A 402 nt1.51□□□□□ -2.17
RFU1Q08003 LSM2YBL026W 288 nt1.51□□□□□ -2.17
RFU1Q08003 MUM2YBR057C 1101 nt1.51□□□□□ -2.17
RFU1Q08003 CCL1YPR025C 1182 nt1.51□□□□□ -2.17
RFU1Q08003 TFC8YPL007C 1767 nt1.51□□□□□ -2.17
RFU1Q08003 BAS1YKR099W 2436 nt1.5□□□□□ -2.17
RFU1Q08003 SYO1YDL063C 1863 nt1.5□□□□□ -2.17
RFU1Q08003 RKM1YPL208W 1752 nt1.5□□□□□ -2.17
RFU1Q08003 YER107W-AYER107W-A 321 nt1.5□□□□□ -2.17
RFU1Q08003 YHR212CYHR212C 336 nt1.5□□□□□ -2.17
RFU1Q08003 YIL012WYIL012W 342 nt1.5□□□□□ -2.17
RFU1Q08003 FIP1YJR093C 984 nt1.5□□□□□ -2.17
RFU1Q08003 CSE4YKL049C 690 nt1.5□□□□□ -2.17
RFU1Q08003 RPF2YKR081C 1035 nt1.5□□□□□ -2.17
RFU1Q08003 YAR060CYAR060C 336 nt1.5□□□□□ -2.17
RFU1Q08003 ARC18YLR370C 537 nt1.5□□□□□ -2.17
RFU1Q08003 YNL162W-AYNL162W-A 219 nt1.5□□□□□ -2.17
RFU1Q08003 YNL234WYNL234W 1281 nt1.5□□□□□ -2.17
RFU1Q08003 YBR174CYBR174C 315 nt1.5□□□□□ -2.17
RFU1Q08003 MED8YBR193C 672 nt1.5□□□□□ -2.17
RFU1Q08003 CFT1YDR301W 4074 nt1.5□□□□□ -2.17
RFU1Q08003 DSE1YER124C 1722 nt1.49□□□□□ -2.17
RFU1Q08003 YJL070CYJL070C 2667 nt1.49□□□□□ -2.17
RFU1Q08003 RPL11BYGR085C 525 nt1.49□□□□□ -2.17
RFU1Q08003 YLR169WYLR169W 354 nt1.49□□□□□ -2.17
RFU1Q08003 IRC21YMR073C 606 nt1.49□□□□□ -2.17
RFU1Q08003 YMR099CYMR099C 894 nt1.49□□□□□ -2.17
RFU1Q08003 YOR277CYOR277C 309 nt1.49□□□□□ -2.17
RFU1Q08003 RPL11AYPR102C 525 nt1.49□□□□□ -2.17
RFU1Q08003 YBR197CYBR197C 654 nt1.49□□□□□ -2.17
RFU1Q08003 CHS1YNL192W 3396 nt1.48□□□□□ -2.17
RFU1Q08003 YOR019WYOR019W 2193 nt1.48□□□□□ -2.17
RFU1Q08003 YPR089WYPR089W 2667 nt1.48□□□□□ -2.17
RFU1Q08003 PAF1YBR279W 1338 nt1.48□□□□□ -2.17
RFU1Q08003 SLM1YIL105C 2061 nt1.48□□□□□ -2.17
RFU1Q08003 YDL186WYDL186W 834 nt1.48□□□□□ -2.17
RFU1Q08003 YER147C-AYER147C-A 411 nt1.48□□□□□ -2.17
RFU1Q08003 DUO1YGL061C 744 nt1.48□□□□□ -2.17
RFU1Q08003 YHR182C-AYHR182C-A 474 nt1.48□□□□□ -2.17
RFU1Q08003 YLR379WYLR379W 375 nt1.48□□□□□ -2.17
RFU1Q08003 ECM13YBL043W 774 nt1.48□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 51.7 ms