Protein–RNA interactions for Protein: Q06455

RUNX1T1, Protein CBFA2T1, humanhuman

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1Q06455 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19■□□□□ 0.63
RUNX1T1Q06455 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19■□□□□ 0.63
RUNX1T1Q06455 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19■□□□□ 0.63
RUNX1T1Q06455 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19■□□□□ 0.63
RUNX1T1Q06455 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19■□□□□ 0.63
RUNX1T1Q06455 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19■□□□□ 0.63
RUNX1T1Q06455 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19■□□□□ 0.63
RUNX1T1Q06455 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RUNX1T1Q06455 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19■□□□□ 0.63
RUNX1T1Q06455 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19■□□□□ 0.63
RUNX1T1Q06455 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RUNX1T1Q06455 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19■□□□□ 0.63
RUNX1T1Q06455 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19■□□□□ 0.63
RUNX1T1Q06455 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RUNX1T1Q06455 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19■□□□□ 0.63
RUNX1T1Q06455 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 FEM1AP1-201ENST00000431297 1995 ntBASIC18.99■□□□□ 0.63
RUNX1T1Q06455 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 AC105233.4-201ENST00000642045 216 ntBASIC18.99■□□□□ 0.63
RUNX1T1Q06455 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 AP006587.3-201ENST00000525742 1516 ntBASIC18.99■□□□□ 0.63
RUNX1T1Q06455 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.99■□□□□ 0.63
RUNX1T1Q06455 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RUNX1T1Q06455 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 MIR572-201ENST00000384983 95 ntBASIC18.97■□□□□ 0.63
RUNX1T1Q06455 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.97■□□□□ 0.63
RUNX1T1Q06455 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 ZNRF2P3-201ENST00000424200 374 ntBASIC18.96■□□□□ 0.63
RUNX1T1Q06455 AC026271.2-201ENST00000428091 497 ntBASIC18.96■□□□□ 0.63
RUNX1T1Q06455 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 AC142381.2-201ENST00000566120 298 ntBASIC18.96■□□□□ 0.63
RUNX1T1Q06455 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNX1T1Q06455 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RUNX1T1Q06455 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RUNX1T1Q06455 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RUNX1T1Q06455 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RUNX1T1Q06455 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.95■□□□□ 0.62
RUNX1T1Q06455 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RUNX1T1Q06455 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms