Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 FAT1YBR041W 2010 nt3.68□□□□□ -1.82
SSL1Q04673 FUN12YAL035W 3009 nt3.68□□□□□ -1.82
SSL1Q04673 PIM1YBL022C 3402 nt3.67□□□□□ -1.82
SSL1Q04673 YKL222CYKL222C 2118 nt3.67□□□□□ -1.82
SSL1Q04673 YCK2YNL154C 1641 nt3.67□□□□□ -1.82
SSL1Q04673 IES6YEL044W 501 nt3.67□□□□□ -1.82
SSL1Q04673 YER137W-AYER137W-A 306 nt3.67□□□□□ -1.82
SSL1Q04673 RPS24BYIL069C 408 nt3.67□□□□□ -1.82
SSL1Q04673 SGN1YIR001C 753 nt3.67□□□□□ -1.82
SSL1Q04673 MAK5YBR142W 2322 nt3.67□□□□□ -1.82
SSL1Q04673 CAF130YGR134W 3369 nt3.66□□□□□ -1.82
SSL1Q04673 SRC1YML034W 2505 nt3.66□□□□□ -1.82
SSL1Q04673 HOP1YIL072W 1818 nt3.66□□□□□ -1.82
SSL1Q04673 YGL042CYGL042C 306 nt3.66□□□□□ -1.82
SSL1Q04673 YGL165CYGL165C 579 nt3.66□□□□□ -1.82
SSL1Q04673 VEL1YGL258W 621 nt3.66□□□□□ -1.82
SSL1Q04673 YHR052W-AYHR052W-A 195 nt3.66□□□□□ -1.82
SSL1Q04673 YHR054W-AYHR054W-A 195 nt3.66□□□□□ -1.82
SSL1Q04673 YML009C-AYML009C-A 327 nt3.66□□□□□ -1.82
SSL1Q04673 ERP4YOR016C 624 nt3.66□□□□□ -1.82
SSL1Q04673 YOR277CYOR277C 309 nt3.66□□□□□ -1.82
SSL1Q04673 YPR039WYPR039W 336 nt3.66□□□□□ -1.82
SSL1Q04673 SKN7YHR206W 1869 nt3.66□□□□□ -1.82
SSL1Q04673 MLH2YLR035C 2088 nt3.66□□□□□ -1.82
SSL1Q04673 CWH41YGL027C 2502 nt3.66□□□□□ -1.82
SSL1Q04673 RNR1YER070W 2667 nt3.66□□□□□ -1.82
SSL1Q04673 LAG1YHL003C 1236 nt3.65□□□□□ -1.83
SSL1Q04673 FYV4YHR059W 393 nt3.65□□□□□ -1.83
SSL1Q04673 YAR053WYAR053W 297 nt3.65□□□□□ -1.83
SSL1Q04673 OST6YML019W 999 nt3.65□□□□□ -1.83
SSL1Q04673 ICY1YMR195W 384 nt3.65□□□□□ -1.83
SSL1Q04673 YJR098CYJR098C 1971 nt3.65□□□□□ -1.83
SSL1Q04673 SWI1YPL016W 3945 nt3.64□□□□□ -1.83
SSL1Q04673 ZDS2YML109W 2829 nt3.64□□□□□ -1.83
SSL1Q04673 MAL33YBR297W 1407 nt3.64□□□□□ -1.83
SSL1Q04673 YHL037CYHL037C 402 nt3.64□□□□□ -1.83
SSL1Q04673 YMR316C-AYMR316C-A 312 nt3.64□□□□□ -1.83
SSL1Q04673 PEX17YNL214W 600 nt3.64□□□□□ -1.83
SSL1Q04673 YOL085W-AYOL085W-A 213 nt3.64□□□□□ -1.83
SSL1Q04673 TSC3YBR058C-A 243 nt3.64□□□□□ -1.83
SSL1Q04673 ROY1YMR258C 1662 nt3.64□□□□□ -1.83
SSL1Q04673 MPS1YDL028C 2295 nt3.64□□□□□ -1.83
SSL1Q04673 SRB4YER022W 2064 nt3.63□□□□□ -1.83
SSL1Q04673 RNH70YGR276C 1662 nt3.63□□□□□ -1.83
SSL1Q04673 YCR081C-AYCR081C-A 237 nt3.63□□□□□ -1.83
SSL1Q04673 YDL152WYDL152W 366 nt3.63□□□□□ -1.83
SSL1Q04673 MRPL31YKL138C 396 nt3.63□□□□□ -1.83
SSL1Q04673 UNG1YML021C 1080 nt3.63□□□□□ -1.83
SSL1Q04673 YMR294W-AYMR294W-A 360 nt3.63□□□□□ -1.83
SSL1Q04673 ZEO1YOL109W 342 nt3.63□□□□□ -1.83
SSL1Q04673 SSP1YHR184W 1716 nt3.63□□□□□ -1.83
SSL1Q04673 YGL140CYGL140C 3660 nt3.63□□□□□ -1.83
SSL1Q04673 YDR089WYDR089W 2610 nt3.63□□□□□ -1.83
SSL1Q04673 SLM2YNL047C 1971 nt3.63□□□□□ -1.83
SSL1Q04673 FRE8YLR047C 2061 nt3.63□□□□□ -1.83
SSL1Q04673 LCB4YOR171C 1875 nt3.62□□□□□ -1.83
SSL1Q04673 MYO3YKL129C 3819 nt3.62□□□□□ -1.83
SSL1Q04673 COX19YLL018C-A 297 nt3.62□□□□□ -1.83
SSL1Q04673 ADI1YMR009W 540 nt3.62□□□□□ -1.83
SSL1Q04673 ECM16YMR128W 3804 nt3.62□□□□□ -1.83
SSL1Q04673 YNL043CYNL043C 321 nt3.62□□□□□ -1.83
SSL1Q04673 YAF9YNL107W 681 nt3.62□□□□□ -1.83
SSL1Q04673 YOR282WYOR282W 321 nt3.62□□□□□ -1.83
SSL1Q04673 CDC45YLR103C 1953 nt3.62□□□□□ -1.83
SSL1Q04673 SRO7YPR032W 3102 nt3.61□□□□□ -1.83
SSL1Q04673 PWP2YCR057C 2772 nt3.61□□□□□ -1.83
SSL1Q04673 YER038W-AYER038W-A 381 nt3.61□□□□□ -1.83
SSL1Q04673 RPS26BYER131W 360 nt3.61□□□□□ -1.83
SSL1Q04673 YGR051CYGR051C 324 nt3.61□□□□□ -1.83
SSL1Q04673 YGR073CYGR073C 372 nt3.61□□□□□ -1.83
SSL1Q04673 YAL031W-AYAL031W-A 309 nt3.61□□□□□ -1.83
SSL1Q04673 YNL179CYNL179C 438 nt3.61□□□□□ -1.83
SSL1Q04673 HSP10YOR020C 321 nt3.61□□□□□ -1.83
SSL1Q04673 YLR001CYLR001C 2589 nt3.61□□□□□ -1.83
SSL1Q04673 KRI1YNL308C 1776 nt3.61□□□□□ -1.83
SSL1Q04673 PMT6YGR199W 2280 nt3.6□□□□□ -1.83
SSL1Q04673 HFD1YMR110C 1599 nt3.6□□□□□ -1.83
SSL1Q04673 YLR230WYLR230W 306 nt3.6□□□□□ -1.83
SSL1Q04673 SIP18YMR175W 240 nt3.6□□□□□ -1.83
SSL1Q04673 MRPL50YNR022C 420 nt3.6□□□□□ -1.83
SSL1Q04673 RED1YLR263W 2484 nt3.6□□□□□ -1.83
SSL1Q04673 CBP2YHL038C 1893 nt3.59□□□□□ -1.83
SSL1Q04673 ABP140YOR239W 1887 nt3.59□□□□□ -1.83
SSL1Q04673 YDL068WYDL068W 330 nt3.59□□□□□ -1.83
SSL1Q04673 YKL156C-AYKL156C-A 117 nt3.59□□□□□ -1.83
SSL1Q04673 YLR302CYLR302C 363 nt3.59□□□□□ -1.83
SSL1Q04673 RDS1YCR106W 2499 nt3.59□□□□□ -1.84
SSL1Q04673 KAP95YLR347C 2586 nt3.58□□□□□ -1.84
SSL1Q04673 SWH1YAR042W 3567 nt3.58□□□□□ -1.84
SSL1Q04673 LCB5YLR260W 2064 nt3.58□□□□□ -1.84
SSL1Q04673 snR65snR65 100 nt3.58□□□□□ -1.84
SSL1Q04673 VTI1YMR197C 654 nt3.58□□□□□ -1.84
SSL1Q04673 HEF3YNL014W 3135 nt3.58□□□□□ -1.84
SSL1Q04673 EMP70YLR083C 2004 nt3.58□□□□□ -1.84
SSL1Q04673 ZDS1YMR273C 2748 nt3.57□□□□□ -1.84
SSL1Q04673 PEX1YKL197C 3132 nt3.57□□□□□ -1.84
SSL1Q04673 NIC96YFR002W 2520 nt3.57□□□□□ -1.84
SSL1Q04673 MES1YGR264C 2256 nt3.57□□□□□ -1.84
SSL1Q04673 YHR214W-AYHR214W-A 486 nt3.57□□□□□ -1.84
SSL1Q04673 OST1YJL002C 1431 nt3.57□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 498 ms