Protein–RNA interactions for Protein: Q01081

U2AF1, Splicing factor U2AF 35 kDa subunit, humanhuman

Known RBP eCLIP

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1Q01081 HAUS3-203ENST00000502440 574 ntTSL 425.89■■□□□ 1.741e-6■■□□□ 14.1
U2AF1Q01081 DUSP12-204ENST00000484291 1252 ntTSL 523.82■■□□□ 1.41e-6■■□□□ 14.1
U2AF1Q01081 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.31e-6■■□□□ 14.1
U2AF1Q01081 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC22.28■■□□□ 1.161e-6■■□□□ 14.1
U2AF1Q01081 DUSP12-203ENST00000464004 740 ntTSL 222.13■■□□□ 1.131e-6■■□□□ 14.1
U2AF1Q01081 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.981e-6■■□□□ 14.1
U2AF1Q01081 AHSA1-209ENST00000555729 621 ntTSL 321.12■□□□□ 0.971e-6■■□□□ 14.1
U2AF1Q01081 AHSA1-206ENST00000555457 641 ntTSL 321.12■□□□□ 0.971e-6■■□□□ 14.1
U2AF1Q01081 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.86■□□□□ 0.931e-6■■□□□ 14.1
U2AF1Q01081 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.791e-6■■□□□ 14.1
U2AF1Q01081 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.511e-6■■□□□ 14.1
U2AF1Q01081 AHSA1-207ENST00000555473 561 ntTSL 216.58■□□□□ 0.241e-6■■□□□ 14.1
U2AF1Q01081 AHSA1-210ENST00000556369 849 ntTSL 515.88■□□□□ 0.131e-6■■□□□ 14.1
U2AF1Q01081 AHSA1-205ENST00000555133 1048 ntTSL 315.39■□□□□ 0.051e-6■■□□□ 14.1
U2AF1Q01081 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.731e-6■■□□□ 14.1
U2AF1Q01081 AHSA1-203ENST00000553374 763 ntTSL 210.23□□□□□ -0.771e-6■■□□□ 14.1
U2AF1Q01081 WDR43-205ENST00000446643 579 ntTSL 410.17□□□□□ -0.781e-6■■□□□ 14.1
U2AF1Q01081 CNOT1-212ENST00000567285 722 ntTSL 48.31□□□□□ -1.081e-6■■□□□ 14.1
U2AF1Q01081 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.151e-6■■□□□ 14.1
U2AF1Q01081 LRIG2-203ENST00000466161 3366 ntTSL 27.83□□□□□ -1.161e-6■■□□□ 14.1
U2AF1Q01081 LRIG2-205ENST00000492207 5076 ntTSL 57.57□□□□□ -1.21e-6■■□□□ 14.1
U2AF1Q01081 DUSP12-202ENST00000463365 398 ntTSL 26.62□□□□□ -1.351e-6■■□□□ 14.1
U2AF1Q01081 BMP2K-206ENST00000507670 1170 ntTSL 1 (best)6.35□□□□□ -1.391e-6■■□□□ 14.1
U2AF1Q01081 LRIG2-202ENST00000466069 564 ntTSL 24.46□□□□□ -1.71e-6■■□□□ 14.1
U2AF1Q01081 HNRNPH1-237ENST00000520415 620 ntTSL 316.87■□□□□ 0.294e-19■■□□□ 14.1
U2AF1Q01081 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.877e-12■■□□□ 14.1
U2AF1Q01081 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.737e-12■■□□□ 14.1
U2AF1Q01081 LENG8-203ENST00000421200 594 ntTSL 319.32■□□□□ 0.688e-12■■□□□ 14.1
U2AF1Q01081 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.297e-12■■□□□ 14.1
U2AF1Q01081 TARS-213ENST00000513066 656 ntTSL 314.15□□□□□ -0.143e-28■■□□□ 14.1
U2AF1Q01081 TARS-216ENST00000627006 171 ntTSL 5 BASIC13.2□□□□□ -0.33e-28■■□□□ 14.1
U2AF1Q01081 TARS-210ENST00000508361 2481 ntTSL 212.55□□□□□ -0.43e-28■■□□□ 14.1
U2AF1Q01081 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.433e-28■■□□□ 14.1
U2AF1Q01081 TARS-207ENST00000505012 608 ntTSL 412.29□□□□□ -0.443e-28■■□□□ 14.1
U2AF1Q01081 TARS-202ENST00000455217 2523 ntTSL 2 BASIC11.59□□□□□ -0.553e-28■■□□□ 14.1
U2AF1Q01081 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.643e-28■■□□□ 14.1
U2AF1Q01081 TARS-212ENST00000509731 2170 ntTSL 1 (best)11□□□□□ -0.653e-28■■□□□ 14.1
U2AF1Q01081 TARS-209ENST00000507716 2475 ntTSL 210.49□□□□□ -0.733e-28■■□□□ 14.1
U2AF1Q01081 TARS-214ENST00000514259 466 ntTSL 45.75□□□□□ -1.493e-28■■□□□ 14.1
U2AF1Q01081 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.641e-7■■□□□ 14.1
U2AF1Q01081 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.641e-7■■□□□ 14.1
U2AF1Q01081 MLF2-208ENST00000541305 564 ntTSL 224.47■■□□□ 1.511e-7■■□□□ 14.1
U2AF1Q01081 PDXDC2P-NPIPB14P-204ENST00000530079 2764 ntTSL 517.48■□□□□ 0.394e-6■■□□□ 14.1
U2AF1Q01081 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC14.97□□□□□ -0.014e-6■■□□□ 14.1
U2AF1Q01081 PABPC1L-206ENST00000372822 536 ntTSL 59.15□□□□□ -0.941e-14■■□□□ 14.1
U2AF1Q01081 NPIPB14P-203ENST00000532298 987 ntBASIC8.43□□□□□ -1.064e-6■■□□□ 14.1
U2AF1Q01081 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.151e-6■■□□□ 14
U2AF1Q01081 NET1-201ENST00000355029 3402 ntTSL 1 (best) BASIC14.5□□□□□ -0.092e-8■■□□□ 14
U2AF1Q01081 NET1-202ENST00000380359 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.252e-8■■□□□ 14
U2AF1Q01081 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.163e-18■■□□□ 14
U2AF1Q01081 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.733e-18■■□□□ 14
U2AF1Q01081 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.583e-18■■□□□ 14
U2AF1Q01081 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.773e-18■■□□□ 14
U2AF1Q01081 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.413e-18■■□□□ 14
U2AF1Q01081 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.363e-18■■□□□ 14
U2AF1Q01081 MAGED2-204ENST00000375058 2048 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.013e-18■■□□□ 14
U2AF1Q01081 MAGED2-202ENST00000347546 2177 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.093e-18■■□□□ 14
U2AF1Q01081 NOP2-208ENST00000537708 598 ntTSL 421.07■□□□□ 0.964e-8■■□□□ 14
U2AF1Q01081 NOP2-217ENST00000544630 657 ntTSL 320.98■□□□□ 0.954e-8■■□□□ 14
U2AF1Q01081 NOP2-213ENST00000542015 1002 ntTSL 319.95■□□□□ 0.784e-8■■□□□ 14
U2AF1Q01081 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.92■□□□□ 0.784e-8■■□□□ 14
U2AF1Q01081 CUL7-202ENST00000478630 749 ntTSL 518.47■□□□□ 0.554e-8■■□□□ 14
U2AF1Q01081 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC17.34■□□□□ 0.374e-8■■□□□ 14
U2AF1Q01081 NOP2-201ENST00000322166 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.174e-8■■□□□ 14
U2AF1Q01081 NOP2-203ENST00000399466 2701 ntTSL 1 (best) BASIC15.94■□□□□ 0.144e-8■■□□□ 14
U2AF1Q01081 NOP2-223ENST00000620535 2791 ntTSL 1 (best) BASIC14.9□□□□□ -0.024e-8■■□□□ 14
U2AF1Q01081 NOP2-207ENST00000537442 2613 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.384e-8■■□□□ 14
U2AF1Q01081 NOP2-206ENST00000536506 889 ntTSL 512.63□□□□□ -0.394e-8■■□□□ 14
U2AF1Q01081 NOP2-218ENST00000545200 2751 ntTSL 1 (best) BASIC12□□□□□ -0.494e-8■■□□□ 14
U2AF1Q01081 NOP2-202ENST00000382421 2736 ntTSL 1 (best) BASIC11.73□□□□□ -0.534e-8■■□□□ 14
U2AF1Q01081 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC23.79■■□□□ 1.48e-7■■□□□ 14
U2AF1Q01081 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.928e-7■■□□□ 14
U2AF1Q01081 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.842e-6■■□□□ 14
U2AF1Q01081 ORMDL1-205ENST00000442547 893 ntTSL 56.34□□□□□ -1.393e-7■■□□□ 14
U2AF1Q01081 SRRM2-224ENST00000575870 696 ntTSL 314.1□□□□□ -0.151e-7■■□□□ 14
U2AF1Q01081 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.233e-6■■□□□ 13.9
U2AF1Q01081 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC16.23■□□□□ 0.193e-6■■□□□ 13.9
U2AF1Q01081 UBA2-210ENST00000607361 754 ntTSL 233.96■■■■□ 3.032e-8■■□□□ 13.9
U2AF1Q01081 UBA2-203ENST00000586313 1458 ntTSL 228.71■■■□□ 2.192e-8■■□□□ 13.9
U2AF1Q01081 UBA2-205ENST00000590048 847 ntTSL 320■□□□□ 0.792e-8■■□□□ 13.9
U2AF1Q01081 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.482e-8■■□□□ 13.9
U2AF1Q01081 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC9.25□□□□□ -0.932e-8■■□□□ 13.9
U2AF1Q01081 UBA2-209ENST00000592841 344 ntTSL 23.98□□□□□ -1.772e-8■■□□□ 13.9
U2AF1Q01081 HNRNPH1-227ENST00000515481 5564 ntTSL 27.73□□□□□ -1.172e-6■■□□□ 13.9
U2AF1Q01081 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC26.22■■□□□ 1.792e-6■■□□□ 13.9
U2AF1Q01081 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC23.97■■□□□ 1.432e-6■■□□□ 13.9
U2AF1Q01081 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.92■□□□□ 0.782e-6■■□□□ 13.9
U2AF1Q01081 CHD1L-205ENST00000467213 2782 ntTSL 1 (best)19.45■□□□□ 0.72e-6■■□□□ 13.9
U2AF1Q01081 CHD1L-208ENST00000488864 2415 ntTSL 217.38■□□□□ 0.372e-6■■□□□ 13.9
U2AF1Q01081 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.232e-6■■□□□ 13.9
U2AF1Q01081 CHD1L-210ENST00000622533 2937 ntTSL 516.37■□□□□ 0.212e-6■■□□□ 13.9
U2AF1Q01081 CHD1L-207ENST00000485113 377 ntTSL 37.35□□□□□ -1.232e-6■■□□□ 13.9
U2AF1Q01081 SRSF2-209ENST00000586778 1001 ntTSL 24.55□□□□□ -1.683e-9■■□□□ 13.9
U2AF1Q01081 PAPOLA-205ENST00000553689 2267 ntTSL 1 (best)23.74■■□□□ 1.394e-12■■□□□ 13.9
U2AF1Q01081 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.564e-12■■□□□ 13.9
U2AF1Q01081 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.69■□□□□ 0.424e-12■■□□□ 13.9
U2AF1Q01081 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.23□□□□□ -1.414e-12■■□□□ 13.9
U2AF1Q01081 PAPOLA-213ENST00000555224 534 ntTSL 55.45□□□□□ -1.544e-12■■□□□ 13.9
U2AF1Q01081 PAPOLA-204ENST00000553461 892 ntTSL 25.06□□□□□ -1.64e-12■■□□□ 13.9
U2AF1Q01081 PAPOLA-215ENST00000555626 2272 ntTSL 1 (best)4.83□□□□□ -1.644e-12■■□□□ 13.9
Retrieved 100 of 10,096 protein–RNA pairs in 71 ms