Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5Q00535 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDK5Q00535 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5Q00535 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.66■□□□□ 0.58
CDK5Q00535 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5Q00535 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5Q00535 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5Q00535 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5Q00535 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5Q00535 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5Q00535 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.66■□□□□ 0.58
CDK5Q00535 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.66■□□□□ 0.58
CDK5Q00535 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5Q00535 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.66■□□□□ 0.58
CDK5Q00535 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDK5Q00535 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.66■□□□□ 0.58
CDK5Q00535 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5Q00535 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CDK5Q00535 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5Q00535 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CDK5Q00535 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5Q00535 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.66■□□□□ 0.58
CDK5Q00535 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5Q00535 AP004607.4-201ENST00000530158 1459 ntBASIC18.65■□□□□ 0.58
CDK5Q00535 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.65■□□□□ 0.58
CDK5Q00535 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5Q00535 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5Q00535 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDK5Q00535 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.65■□□□□ 0.58
CDK5Q00535 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5Q00535 AL136116.3-201ENST00000402907 1138 ntBASIC18.65■□□□□ 0.58
CDK5Q00535 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.65■□□□□ 0.58
CDK5Q00535 AC024257.2-201ENST00000549699 147 ntBASIC18.65■□□□□ 0.58
CDK5Q00535 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK5Q00535 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5Q00535 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5Q00535 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5Q00535 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK5Q00535 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5Q00535 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5Q00535 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDK5Q00535 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.64■□□□□ 0.58
CDK5Q00535 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CDK5Q00535 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDK5Q00535 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDK5Q00535 AC061975.6-201ENST00000579045 1553 ntBASIC18.64■□□□□ 0.58
CDK5Q00535 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.64■□□□□ 0.58
CDK5Q00535 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.64■□□□□ 0.57
CDK5Q00535 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.64■□□□□ 0.57
CDK5Q00535 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK5Q00535 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDK5Q00535 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK5Q00535 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDK5Q00535 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.64■□□□□ 0.57
CDK5Q00535 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.64■□□□□ 0.57
CDK5Q00535 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.64■□□□□ 0.57
CDK5Q00535 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.64■□□□□ 0.57
CDK5Q00535 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.64■□□□□ 0.57
CDK5Q00535 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDK5Q00535 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK5Q00535 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CDK5Q00535 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK5Q00535 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK5Q00535 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.63■□□□□ 0.57
CDK5Q00535 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK5Q00535 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK5Q00535 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CDK5Q00535 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK5Q00535 AL136162.1-201ENST00000607711 1078 ntBASIC18.63■□□□□ 0.57
CDK5Q00535 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDK5Q00535 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.63■□□□□ 0.57
CDK5Q00535 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDK5Q00535 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDK5Q00535 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.63■□□□□ 0.57
CDK5Q00535 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK5Q00535 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CDK5Q00535 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDK5Q00535 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5Q00535 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.62■□□□□ 0.57
CDK5Q00535 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5Q00535 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.62■□□□□ 0.57
CDK5Q00535 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.62■□□□□ 0.57
CDK5Q00535 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5Q00535 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.62■□□□□ 0.57
CDK5Q00535 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CDK5Q00535 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5Q00535 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.62■□□□□ 0.57
CDK5Q00535 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5Q00535 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.62■□□□□ 0.57
CDK5Q00535 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5Q00535 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDK5Q00535 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5Q00535 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.61■□□□□ 0.57
CDK5Q00535 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CDK5Q00535 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5Q00535 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5Q00535 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK5Q00535 AC092720.2-201ENST00000602388 1665 ntBASIC18.61■□□□□ 0.57
CDK5Q00535 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.61■□□□□ 0.57
CDK5Q00535 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms