Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SEC61BP60468 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
SEC61BP60468 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SEC61BP60468 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SEC61BP60468 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SEC61BP60468 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SEC61BP60468 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC11.11□□□□□ -0.63
SEC61BP60468 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SEC61BP60468 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SEC61BP60468 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SEC61BP60468 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
SEC61BP60468 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC11.11□□□□□ -0.63
SEC61BP60468 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SEC61BP60468 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SEC61BP60468 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SEC61BP60468 MIR718-201ENST00000390190 70 ntBASIC11.11□□□□□ -0.63
SEC61BP60468 PTPA-214ENST00000423100 988 ntTSL 2 BASIC11.11□□□□□ -0.63
SEC61BP60468 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC11.11□□□□□ -0.63
SEC61BP60468 UBE2SP1-201ENST00000450587 669 ntBASIC11.11□□□□□ -0.63
SEC61BP60468 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC11.11□□□□□ -0.63
SEC61BP60468 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC11.11□□□□□ -0.63
SEC61BP60468 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SEC61BP60468 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC11.11□□□□□ -0.63
SEC61BP60468 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SEC61BP60468 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SEC61BP60468 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SEC61BP60468 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
SEC61BP60468 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC11.11□□□□□ -0.63
SEC61BP60468 STX5-203ENST00000394690 1568 ntTSL 5 BASIC11.11□□□□□ -0.63
SEC61BP60468 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SEC61BP60468 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SEC61BP60468 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SEC61BP60468 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
SEC61BP60468 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SEC61BP60468 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SEC61BP60468 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SEC61BP60468 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SEC61BP60468 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SEC61BP60468 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SEC61BP60468 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC11.1□□□□□ -0.63
SEC61BP60468 AL355472.2-201ENST00000422958 438 ntBASIC11.1□□□□□ -0.63
SEC61BP60468 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC11.1□□□□□ -0.63
SEC61BP60468 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SEC61BP60468 UNC93B4-201ENST00000505679 747 ntBASIC11.1□□□□□ -0.63
SEC61BP60468 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
SEC61BP60468 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC11.1□□□□□ -0.63
SEC61BP60468 FAM197Y4-202ENST00000622692 608 ntBASIC11.1□□□□□ -0.63
SEC61BP60468 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SEC61BP60468 AC092368.3-202ENST00000574180 1591 ntBASIC11.1□□□□□ -0.63
SEC61BP60468 NARF-205ENST00000412079 1760 ntTSL 5 BASIC11.1□□□□□ -0.63
SEC61BP60468 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SEC61BP60468 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SEC61BP60468 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC11.1□□□□□ -0.63
SEC61BP60468 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC11.09□□□□□ -0.63
SEC61BP60468 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 KRT17P1-201ENST00000399211 1546 ntBASIC11.09□□□□□ -0.63
SEC61BP60468 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC11.09□□□□□ -0.63
SEC61BP60468 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SEC61BP60468 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 LTK-203ENST00000453182 2412 ntTSL 2 BASIC11.09□□□□□ -0.63
SEC61BP60468 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SEC61BP60468 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
SEC61BP60468 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC11.09□□□□□ -0.63
SEC61BP60468 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC11.09□□□□□ -0.63
SEC61BP60468 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC11.09□□□□□ -0.63
SEC61BP60468 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 CRK-204ENST00000574295 1391 ntTSL 5 BASIC11.09□□□□□ -0.63
SEC61BP60468 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC11.09□□□□□ -0.63
SEC61BP60468 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC11.09□□□□□ -0.63
SEC61BP60468 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC11.09□□□□□ -0.63
SEC61BP60468 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
SEC61BP60468 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 RPS2P52-201ENST00000469610 820 ntBASIC11.09□□□□□ -0.63
SEC61BP60468 RPS2P4-201ENST00000476944 856 ntBASIC11.09□□□□□ -0.63
SEC61BP60468 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC11.09□□□□□ -0.63
SEC61BP60468 AC073648.6-201ENST00000641589 218 ntBASIC11.09□□□□□ -0.63
SEC61BP60468 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SEC61BP60468 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 AC093323.1-202ENST00000635031 2045 ntBASIC11.09□□□□□ -0.63
SEC61BP60468 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC11.09□□□□□ -0.63
SEC61BP60468 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SEC61BP60468 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SEC61BP60468 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SEC61BP60468 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SEC61BP60468 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC11.08□□□□□ -0.64
SEC61BP60468 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SEC61BP60468 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SEC61BP60468 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SEC61BP60468 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SEC61BP60468 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SEC61BP60468 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SEC61BP60468 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms