Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 FAR11YNL127W 2862 nt2.31□□□□□ -2.04
YNL040WP53960 PRE4YFR050C 801 nt2.31□□□□□ -2.04
YNL040WP53960 YGL039WYGL039W 1047 nt2.31□□□□□ -2.04
YNL040WP53960 YHL044WYHL044W 708 nt2.31□□□□□ -2.04
YNL040WP53960 YKL115CYKL115C 393 nt2.31□□□□□ -2.04
YNL040WP53960 ATG10YLL042C 504 nt2.31□□□□□ -2.04
YNL040WP53960 SMD2YLR275W 333 nt2.31□□□□□ -2.04
YNL040WP53960 CCW14YLR390W-A 717 nt2.31□□□□□ -2.04
YNL040WP53960 YOL134CYOL134C 390 nt2.31□□□□□ -2.04
YNL040WP53960 DGK1YOR311C 873 nt2.31□□□□□ -2.04
YNL040WP53960 SAP185YJL098W 3177 nt2.31□□□□□ -2.04
YNL040WP53960 YKL075CYKL075C 1353 nt2.31□□□□□ -2.04
YNL040WP53960 SSN2YDR443C 4263 nt2.31□□□□□ -2.04
YNL040WP53960 UTP14YML093W 2700 nt2.31□□□□□ -2.04
YNL040WP53960 NGG1YDR176W 2109 nt2.3□□□□□ -2.04
YNL040WP53960 ARP5YNL059C 2268 nt2.3□□□□□ -2.04
YNL040WP53960 SUL1YBR294W 2580 nt2.3□□□□□ -2.04
YNL040WP53960 ATP16YDL004W 483 nt2.3□□□□□ -2.04
YNL040WP53960 VAB2YEL005C 849 nt2.3□□□□□ -2.04
YNL040WP53960 YKL069WYKL069W 543 nt2.3□□□□□ -2.04
YNL040WP53960 HSP10YOR020C 321 nt2.3□□□□□ -2.04
YNL040WP53960 SLM4YBR077C 489 nt2.3□□□□□ -2.04
YNL040WP53960 VMA9YCL005W-A 222 nt2.3□□□□□ -2.04
YNL040WP53960 IRA2YOL081W 9240 nt2.3□□□□□ -2.04
YNL040WP53960 AGE1YDR524C 1449 nt2.3□□□□□ -2.04
YNL040WP53960 CST9YLR394W 1449 nt2.3□□□□□ -2.04
YNL040WP53960 NUR1YDL089W 1455 nt2.3□□□□□ -2.04
YNL040WP53960 UFD4YKL010C 4452 nt2.3□□□□□ -2.04
YNL040WP53960 NUP170YBL079W 4509 nt2.29□□□□□ -2.04
YNL040WP53960 POM152YMR129W 4014 nt2.29□□□□□ -2.04
YNL040WP53960 ASI3YNL008C 2031 nt2.29□□□□□ -2.04
YNL040WP53960 YJL181WYJL181W 1836 nt2.29□□□□□ -2.04
YNL040WP53960 Q0255Q0255 1419 nt2.29□□□□□ -2.04
YNL040WP53960 TIM11YDR322C-A 291 nt2.29□□□□□ -2.04
YNL040WP53960 SLD5YDR489W 885 nt2.29□□□□□ -2.04
YNL040WP53960 VTC1YER072W 390 nt2.29□□□□□ -2.04
YNL040WP53960 MVB12YGR206W 306 nt2.29□□□□□ -2.04
YNL040WP53960 YKE2YLR200W 345 nt2.29□□□□□ -2.04
YNL040WP53960 YOR277CYOR277C 309 nt2.29□□□□□ -2.04
YNL040WP53960 MED8YBR193C 672 nt2.29□□□□□ -2.04
YNL040WP53960 FIR1YER032W 2631 nt2.29□□□□□ -2.04
YNL040WP53960 ISW1YBR245C 3390 nt2.28□□□□□ -2.04
YNL040WP53960 NOP12YOL041C 1380 nt2.28□□□□□ -2.04
YNL040WP53960 KEI1YDR367W 666 nt2.28□□□□□ -2.04
YNL040WP53960 RMD6YEL072W 696 nt2.28□□□□□ -2.04
YNL040WP53960 YER046W-AYER046W-A 330 nt2.28□□□□□ -2.04
YNL040WP53960 SAE2YGL175C 1038 nt2.28□□□□□ -2.04
YNL040WP53960 YIL068W-AYIL068W-A 384 nt2.28□□□□□ -2.04
YNL040WP53960 AYR1YIL124W 894 nt2.28□□□□□ -2.04
YNL040WP53960 YIR036W-AYIR036W-A 402 nt2.28□□□□□ -2.04
YNL040WP53960 YLR050CYLR050C 486 nt2.28□□□□□ -2.04
YNL040WP53960 ICY1YMR195W 384 nt2.28□□□□□ -2.04
YNL040WP53960 RPL16BYNL069C 597 nt2.28□□□□□ -2.04
YNL040WP53960 DGR1YNL130C-A 147 nt2.28□□□□□ -2.04
YNL040WP53960 YKU80YMR106C 1890 nt2.28□□□□□ -2.04
YNL040WP53960 SSE1YPL106C 2082 nt2.27□□□□□ -2.05
YNL040WP53960 TOF1YNL273W 3717 nt2.27□□□□□ -2.05
YNL040WP53960 SPB1YCL054W 2526 nt2.27□□□□□ -2.05
YNL040WP53960 YDR381C-AYDR381C-A 345 nt2.27□□□□□ -2.05
YNL040WP53960 GCN4YEL009C 846 nt2.27□□□□□ -2.05
YNL040WP53960 YER107W-AYER107W-A 321 nt2.27□□□□□ -2.05
YNL040WP53960 ERV1YGR029W 570 nt2.27□□□□□ -2.05
YNL040WP53960 YAL037WYAL037W 804 nt2.27□□□□□ -2.05
YNL040WP53960 VPS51YKR020W 495 nt2.27□□□□□ -2.05
YNL040WP53960 UBP2YOR124C 3819 nt2.27□□□□□ -2.05
YNL040WP53960 GRX5YPL059W 453 nt2.27□□□□□ -2.05
YNL040WP53960 PIS1YPR113W 663 nt2.27□□□□□ -2.05
YNL040WP53960 SSD1YDR293C 3753 nt2.27□□□□□ -2.05
YNL040WP53960 TAE2YPL009C 3117 nt2.27□□□□□ -2.05
YNL040WP53960 SMY2YBR172C 2223 nt2.26□□□□□ -2.05
YNL040WP53960 GUP1YGL084C 1683 nt2.26□□□□□ -2.05
YNL040WP53960 YBT1YLL048C 4986 nt2.26□□□□□ -2.05
YNL040WP53960 SRD1YCR018C 666 nt2.26□□□□□ -2.05
YNL040WP53960 RPC25YKL144C 639 nt2.26□□□□□ -2.05
YNL040WP53960 UTP22YGR090W 3714 nt2.26□□□□□ -2.05
YNL040WP53960 ANR2YKL047W 1551 nt2.26□□□□□ -2.05
YNL040WP53960 SAK1YER129W 3429 nt2.26□□□□□ -2.05
YNL040WP53960 STI1YOR027W 1770 nt2.26□□□□□ -2.05
YNL040WP53960 PHO2YDL106C 1680 nt2.25□□□□□ -2.05
YNL040WP53960 APC2YLR127C 2562 nt2.25□□□□□ -2.05
YNL040WP53960 YDR261W-AYDR261W-A 1317 nt2.25□□□□□ -2.05
YNL040WP53960 SLF1YDR515W 1344 nt2.25□□□□□ -2.05
YNL040WP53960 BTN2YGR142W 1233 nt2.25□□□□□ -2.05
YNL040WP53960 YHR052W-AYHR052W-A 195 nt2.25□□□□□ -2.05
YNL040WP53960 YHR054W-AYHR054W-A 195 nt2.25□□□□□ -2.05
YNL040WP53960 YJL052C-AYJL052C-A 120 nt2.25□□□□□ -2.05
YNL040WP53960 MGM1YOR211C 2646 nt2.24□□□□□ -2.05
YNL040WP53960 YEL1YBL060W 2064 nt2.24□□□□□ -2.05
YNL040WP53960 UBC13YDR092W 462 nt2.24□□□□□ -2.05
YNL040WP53960 RPS24AYER074W 408 nt2.24□□□□□ -2.05
YNL040WP53960 YER158W-AYER158W-A 216 nt2.24□□□□□ -2.05
YNL040WP53960 MRP49YKL167C 414 nt2.24□□□□□ -2.05
YNL040WP53960 YBL029C-AYBL029C-A 285 nt2.24□□□□□ -2.05
YNL040WP53960 GRE2YOL151W 1029 nt2.24□□□□□ -2.05
YNL040WP53960 RRP15YPR143W 753 nt2.24□□□□□ -2.05
YNL040WP53960 YCL023CYCL023C 348 nt2.24□□□□□ -2.05
YNL040WP53960 YLR108CYLR108C 1458 nt2.24□□□□□ -2.05
YNL040WP53960 SEC31YDL195W 3822 nt2.24□□□□□ -2.05
YNL040WP53960 SEC16YPL085W 6588 nt2.24□□□□□ -2.05
YNL040WP53960 GIS1YDR096W 2685 nt2.24□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms