Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
ZNF140P52738 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF140P52738 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF140P52738 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.62■□□□□ 0.89
ZNF140P52738 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.62■□□□□ 0.89
ZNF140P52738 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF140P52738 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF140P52738 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF140P52738 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.62■□□□□ 0.89
ZNF140P52738 AC011767.1-201ENST00000617410 1153 ntBASIC20.62■□□□□ 0.89
ZNF140P52738 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF140P52738 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF140P52738 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF140P52738 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF140P52738 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF140P52738 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ZNF140P52738 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
ZNF140P52738 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF140P52738 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.61■□□□□ 0.89
ZNF140P52738 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF140P52738 AC007322.4-201ENST00000509611 723 ntBASIC20.61■□□□□ 0.89
ZNF140P52738 DUX4L16-201ENST00000555130 1264 ntBASIC20.61■□□□□ 0.89
ZNF140P52738 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.61■□□□□ 0.89
ZNF140P52738 AC013268.1-206ENST00000638368 961 ntBASIC20.61■□□□□ 0.89
ZNF140P52738 AC112229.1-201ENST00000639295 961 ntBASIC20.61■□□□□ 0.89
ZNF140P52738 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF140P52738 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF140P52738 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF140P52738 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.61■□□□□ 0.89
ZNF140P52738 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF140P52738 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
ZNF140P52738 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF140P52738 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF140P52738 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF140P52738 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF140P52738 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNF140P52738 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF140P52738 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF140P52738 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF140P52738 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF140P52738 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.6■□□□□ 0.89
ZNF140P52738 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNF140P52738 CNN2P6-201ENST00000439038 900 ntBASIC20.6■□□□□ 0.89
ZNF140P52738 BID-214ENST00000617586 542 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNF140P52738 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.6■□□□□ 0.89
ZNF140P52738 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF140P52738 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNF140P52738 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF140P52738 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF140P52738 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF140P52738 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF140P52738 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF140P52738 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF140P52738 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF140P52738 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.6■□□□□ 0.89
ZNF140P52738 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.59■□□□□ 0.89
ZNF140P52738 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZNF140P52738 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF140P52738 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF140P52738 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF140P52738 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF140P52738 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNF140P52738 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF140P52738 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ZNF140P52738 AC007322.3-201ENST00000426526 701 ntBASIC20.59■□□□□ 0.89
ZNF140P52738 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF140P52738 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF140P52738 IKBKGP1-201ENST00000612193 1073 ntBASIC20.59■□□□□ 0.89
ZNF140P52738 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNF140P52738 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF140P52738 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF140P52738 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ZNF140P52738 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF140P52738 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF140P52738 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF140P52738 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ZNF140P52738 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF140P52738 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.58■□□□□ 0.89
ZNF140P52738 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF140P52738 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.58■□□□□ 0.89
ZNF140P52738 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF140P52738 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ZNF140P52738 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.58■□□□□ 0.89
ZNF140P52738 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.58■□□□□ 0.89
ZNF140P52738 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF140P52738 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF140P52738 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF140P52738 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.58■□□□□ 0.89
ZNF140P52738 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.58■□□□□ 0.89
ZNF140P52738 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF140P52738 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF140P52738 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.58■□□□□ 0.89
ZNF140P52738 AC027702.1-201ENST00000563810 1770 ntBASIC20.58■□□□□ 0.89
ZNF140P52738 AC007225.1-201ENST00000566331 1836 ntBASIC20.57■□□□□ 0.88
ZNF140P52738 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF140P52738 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF140P52738 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF140P52738 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF140P52738 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ZNF140P52738 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms