Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CENPAP49450 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPAP49450 AC055733.4-201ENST00000638462 1354 ntBASIC18.66■□□□□ 0.58
CENPAP49450 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CENPAP49450 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPAP49450 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPAP49450 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.65■□□□□ 0.58
CENPAP49450 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CENPAP49450 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CENPAP49450 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CENPAP49450 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPAP49450 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.65■□□□□ 0.58
CENPAP49450 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CENPAP49450 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPAP49450 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.65■□□□□ 0.58
CENPAP49450 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CENPAP49450 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPAP49450 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPAP49450 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.65■□□□□ 0.58
CENPAP49450 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPAP49450 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.65■□□□□ 0.58
CENPAP49450 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.65■□□□□ 0.58
CENPAP49450 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CENPAP49450 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CENPAP49450 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CENPAP49450 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CENPAP49450 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CENPAP49450 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CENPAP49450 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CENPAP49450 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.64■□□□□ 0.57
CENPAP49450 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.64■□□□□ 0.57
CENPAP49450 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPAP49450 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CENPAP49450 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CENPAP49450 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPAP49450 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPAP49450 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CENPAP49450 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.64■□□□□ 0.57
CENPAP49450 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CENPAP49450 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CENPAP49450 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPAP49450 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CENPAP49450 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPAP49450 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.63■□□□□ 0.57
CENPAP49450 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.63■□□□□ 0.57
CENPAP49450 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CENPAP49450 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.63■□□□□ 0.57
CENPAP49450 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 AL031432.3-201ENST00000607698 485 ntBASIC18.63■□□□□ 0.57
CENPAP49450 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
CENPAP49450 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CENPAP49450 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CENPAP49450 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPAP49450 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CENPAP49450 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPAP49450 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.62■□□□□ 0.57
CENPAP49450 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CENPAP49450 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CENPAP49450 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPAP49450 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.62■□□□□ 0.57
CENPAP49450 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CENPAP49450 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
CENPAP49450 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CENPAP49450 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.62■□□□□ 0.57
CENPAP49450 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.62■□□□□ 0.57
CENPAP49450 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.62■□□□□ 0.57
CENPAP49450 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.62■□□□□ 0.57
CENPAP49450 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.62■□□□□ 0.57
CENPAP49450 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.62■□□□□ 0.57
CENPAP49450 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.62■□□□□ 0.57
CENPAP49450 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.62■□□□□ 0.57
CENPAP49450 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.62■□□□□ 0.57
CENPAP49450 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPAP49450 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPAP49450 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CENPAP49450 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPAP49450 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CENPAP49450 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPAP49450 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.62■□□□□ 0.57
CENPAP49450 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.62■□□□□ 0.57
CENPAP49450 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPAP49450 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPAP49450 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CENPAP49450 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.61■□□□□ 0.57
CENPAP49450 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPAP49450 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CENPAP49450 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms