Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.13■□□□□ 0.49
CX3CR1P49238 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.13■□□□□ 0.49
CX3CR1P49238 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CX3CR1P49238 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CX3CR1P49238 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CX3CR1P49238 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CX3CR1P49238 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CX3CR1P49238 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CX3CR1P49238 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CX3CR1P49238 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CX3CR1P49238 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CX3CR1P49238 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.13■□□□□ 0.49
CX3CR1P49238 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CX3CR1P49238 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CX3CR1P49238 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CX3CR1P49238 FEM1AP1-201ENST00000431297 1995 ntBASIC18.12■□□□□ 0.49
CX3CR1P49238 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.12■□□□□ 0.49
CX3CR1P49238 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CX3CR1P49238 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CX3CR1P49238 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CX3CR1P49238 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CX3CR1P49238 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.12■□□□□ 0.49
CX3CR1P49238 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CX3CR1P49238 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CX3CR1P49238 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CX3CR1P49238 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CX3CR1P49238 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.12■□□□□ 0.49
CX3CR1P49238 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.12■□□□□ 0.49
CX3CR1P49238 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CX3CR1P49238 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CX3CR1P49238 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CX3CR1P49238 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CX3CR1P49238 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CX3CR1P49238 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.11■□□□□ 0.49
CX3CR1P49238 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.11■□□□□ 0.49
CX3CR1P49238 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
CX3CR1P49238 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CX3CR1P49238 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CX3CR1P49238 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CX3CR1P49238 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.11■□□□□ 0.49
CX3CR1P49238 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CX3CR1P49238 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CX3CR1P49238 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CX3CR1P49238 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CX3CR1P49238 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CR1P49238 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CX3CR1P49238 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CX3CR1P49238 LINC01006-201ENST00000333319 2292 ntBASIC18.1■□□□□ 0.49
CX3CR1P49238 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CR1P49238 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.1■□□□□ 0.49
CX3CR1P49238 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CR1P49238 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CR1P49238 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.1■□□□□ 0.49
CX3CR1P49238 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CR1P49238 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.1■□□□□ 0.49
CX3CR1P49238 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CR1P49238 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.1■□□□□ 0.49
CX3CR1P49238 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.1■□□□□ 0.49
CX3CR1P49238 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.1■□□□□ 0.49
CX3CR1P49238 AC138907.5-202ENST00000569484 235 ntBASIC18.1■□□□□ 0.49
CX3CR1P49238 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.1■□□□□ 0.49
CX3CR1P49238 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.1■□□□□ 0.49
CX3CR1P49238 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CR1P49238 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CR1P49238 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CR1P49238 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.1■□□□□ 0.49
CX3CR1P49238 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CR1P49238 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CR1P49238 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.09■□□□□ 0.49
CX3CR1P49238 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CX3CR1P49238 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CX3CR1P49238 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CX3CR1P49238 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CR1P49238 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CR1P49238 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.09■□□□□ 0.49
CX3CR1P49238 AC120498.10-201ENST00000621827 505 ntBASIC18.09■□□□□ 0.49
CX3CR1P49238 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CR1P49238 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CR1P49238 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CR1P49238 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CR1P49238 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CX3CR1P49238 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CX3CR1P49238 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CR1P49238 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.09■□□□□ 0.49
CX3CR1P49238 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CR1P49238 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CR1P49238 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.08■□□□□ 0.49
CX3CR1P49238 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.08■□□□□ 0.49
CX3CR1P49238 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CX3CR1P49238 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.08■□□□□ 0.49
CX3CR1P49238 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CX3CR1P49238 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CX3CR1P49238 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CX3CR1P49238 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CX3CR1P49238 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CX3CR1P49238 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CX3CR1P49238 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.08■□□□□ 0.48
CX3CR1P49238 AC123595.1-201ENST00000440769 1046 ntBASIC18.08■□□□□ 0.48
CX3CR1P49238 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.08■□□□□ 0.48
CX3CR1P49238 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms