Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 KRT18P20-201ENST00000548986 1279 ntBASIC20.02■□□□□ 0.8
HNF4AP41235 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.02■□□□□ 0.8
HNF4AP41235 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HNF4AP41235 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.02■□□□□ 0.8
HNF4AP41235 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.02■□□□□ 0.8
HNF4AP41235 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
HNF4AP41235 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HNF4AP41235 PLK5-205ENST00000642079 1969 ntBASIC20.01■□□□□ 0.79
HNF4AP41235 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.01■□□□□ 0.79
HNF4AP41235 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.01■□□□□ 0.79
HNF4AP41235 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HNF4AP41235 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.01■□□□□ 0.79
HNF4AP41235 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.01■□□□□ 0.79
HNF4AP41235 SLC7A5P2-201ENST00000553010 536 ntBASIC20.01■□□□□ 0.79
HNF4AP41235 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
HNF4AP41235 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HNF4AP41235 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
HNF4AP41235 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HNF4AP41235 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HNF4AP41235 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HNF4AP41235 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HNF4AP41235 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HNF4AP41235 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HNF4AP41235 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
HNF4AP41235 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20■□□□□ 0.79
HNF4AP41235 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HNF4AP41235 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20■□□□□ 0.79
HNF4AP41235 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
HNF4AP41235 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HNF4AP41235 AC245052.3-201ENST00000450182 901 ntBASIC20■□□□□ 0.79
HNF4AP41235 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20■□□□□ 0.79
HNF4AP41235 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HNF4AP41235 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HNF4AP41235 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HNF4AP41235 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HNF4AP41235 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HNF4AP41235 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
HNF4AP41235 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HNF4AP41235 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HNF4AP41235 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HNF4AP41235 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HNF4AP41235 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.99■□□□□ 0.79
HNF4AP41235 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HNF4AP41235 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.99■□□□□ 0.79
HNF4AP41235 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.99■□□□□ 0.79
HNF4AP41235 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HNF4AP41235 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HNF4AP41235 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HNF4AP41235 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HNF4AP41235 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HNF4AP41235 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HNF4AP41235 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
HNF4AP41235 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HNF4AP41235 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HNF4AP41235 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HNF4AP41235 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HNF4AP41235 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.98■□□□□ 0.79
HNF4AP41235 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HNF4AP41235 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HNF4AP41235 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HNF4AP41235 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
HNF4AP41235 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HNF4AP41235 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HNF4AP41235 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.98■□□□□ 0.79
HNF4AP41235 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.98■□□□□ 0.79
HNF4AP41235 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.98■□□□□ 0.79
HNF4AP41235 AC137761.2-201ENST00000561729 223 ntBASIC19.98■□□□□ 0.79
HNF4AP41235 AC145350.3-201ENST00000569033 163 ntBASIC19.98■□□□□ 0.79
HNF4AP41235 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.98■□□□□ 0.79
HNF4AP41235 RARRES2P11-201ENST00000635158 484 ntBASIC19.98■□□□□ 0.79
HNF4AP41235 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
HNF4AP41235 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.98■□□□□ 0.79
HNF4AP41235 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HNF4AP41235 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
HNF4AP41235 AC011484.1-201ENST00000377652 1995 ntBASIC19.97■□□□□ 0.79
HNF4AP41235 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HNF4AP41235 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HNF4AP41235 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
HNF4AP41235 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HNF4AP41235 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HNF4AP41235 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.97■□□□□ 0.79
HNF4AP41235 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.97■□□□□ 0.79
HNF4AP41235 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
HNF4AP41235 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HNF4AP41235 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HNF4AP41235 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HNF4AP41235 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HNF4AP41235 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HNF4AP41235 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HNF4AP41235 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HNF4AP41235 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HNF4AP41235 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.96■□□□□ 0.79
HNF4AP41235 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HNF4AP41235 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HNF4AP41235 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HNF4AP41235 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
HNF4AP41235 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.96■□□□□ 0.79
HNF4AP41235 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.96■□□□□ 0.79
HNF4AP41235 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.96■□□□□ 0.79
HNF4AP41235 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms