Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 tL(CAA)LtL(CAA)L 82 nt6.36□□□□□ -1.39
PTP3P40048 tL(CAA)MtL(CAA)M 82 nt6.36□□□□□ -1.39
PTP3P40048 tL(CAA)NtL(CAA)N 82 nt6.36□□□□□ -1.39
PTP3P40048 URM1YIL008W 300 nt6.36□□□□□ -1.39
PTP3P40048 YOL085W-AYOL085W-A 213 nt6.36□□□□□ -1.39
PTP3P40048 YOL131WYOL131W 327 nt6.36□□□□□ -1.39
PTP3P40048 PFY1YOR122C 381 nt6.36□□□□□ -1.39
PTP3P40048 LCB4YOR171C 1875 nt6.36□□□□□ -1.39
PTP3P40048 YKL100CYKL100C 1764 nt6.36□□□□□ -1.39
PTP3P40048 DAP2YHR028C 2457 nt6.36□□□□□ -1.39
PTP3P40048 ARG2YJL071W 1725 nt6.36□□□□□ -1.39
PTP3P40048 SMI1YGR229C 1518 nt6.35□□□□□ -1.39
PTP3P40048 SEC6YIL068C 2418 nt6.35□□□□□ -1.39
PTP3P40048 FRQ1YDR373W 573 nt6.35□□□□□ -1.39
PTP3P40048 RPS26BYER131W 360 nt6.35□□□□□ -1.39
PTP3P40048 RPL29YFR032C-A 180 nt6.35□□□□□ -1.39
PTP3P40048 CDC26YFR036W 375 nt6.35□□□□□ -1.39
PTP3P40048 SGO1YOR073W 1773 nt6.35□□□□□ -1.39
PTP3P40048 CUL3YGR003W 2235 nt6.35□□□□□ -1.39
PTP3P40048 VAC14YLR386W 2643 nt6.35□□□□□ -1.39
PTP3P40048 YLR001CYLR001C 2589 nt6.35□□□□□ -1.39
PTP3P40048 DBP6YNR038W 1890 nt6.34□□□□□ -1.39
PTP3P40048 OLI1Q0130 231 nt6.34□□□□□ -1.39
PTP3P40048 MTC3YGL226W 372 nt6.34□□□□□ -1.39
PTP3P40048 YIL055CYIL055C 1884 nt6.33□□□□□ -1.4
PTP3P40048 FMP10YER182W 735 nt6.33□□□□□ -1.4
PTP3P40048 RPS21BYJL136C 264 nt6.33□□□□□ -1.4
PTP3P40048 YLR154W-BYLR154W-B 165 nt6.33□□□□□ -1.4
PTP3P40048 FOX2YKR009C 2703 nt6.33□□□□□ -1.4
PTP3P40048 HTA1YDR225W 399 nt6.32□□□□□ -1.4
PTP3P40048 tF(GAA)QtF(GAA)Q 75 nt6.32□□□□□ -1.4
PTP3P40048 RPL36BYPL249C-A 303 nt6.32□□□□□ -1.4
PTP3P40048 LTP1YPR073C 486 nt6.32□□□□□ -1.4
PTP3P40048 SSH4YKL124W 1740 nt6.32□□□□□ -1.4
PTP3P40048 ALR2YFL050C 2577 nt6.32□□□□□ -1.4
PTP3P40048 ATP22YDR350C 2055 nt6.32□□□□□ -1.4
PTP3P40048 CYM1YDR430C 2970 nt6.31□□□□□ -1.4
PTP3P40048 YEL1YBL060W 2064 nt6.31□□□□□ -1.4
PTP3P40048 MZM1YDR493W 372 nt6.31□□□□□ -1.4
PTP3P40048 REB1YBR049C 2433 nt6.3□□□□□ -1.4
PTP3P40048 TFB5YDR079C-A 219 nt6.3□□□□□ -1.4
PTP3P40048 INA22YIR024C 651 nt6.3□□□□□ -1.4
PTP3P40048 MPS3YJL019W 2049 nt6.3□□□□□ -1.4
PTP3P40048 SRP68YPL243W 1800 nt6.29□□□□□ -1.4
PTP3P40048 BIT2YBR270C 1638 nt6.29□□□□□ -1.4
PTP3P40048 BEM4YPL161C 1902 nt6.29□□□□□ -1.4
PTP3P40048 NAM2YLR382C 2685 nt6.29□□□□□ -1.4
PTP3P40048 BCD1YHR040W 1101 nt6.29□□□□□ -1.4
PTP3P40048 HTB2YBL002W 396 nt6.29□□□□□ -1.4
PTP3P40048 YML057C-AYML057C-A 390 nt6.29□□□□□ -1.4
PTP3P40048 YPL278CYPL278C 303 nt6.29□□□□□ -1.4
PTP3P40048 DPH6YLR143W 2058 nt6.29□□□□□ -1.4
PTP3P40048 ISW2YOR304W 3363 nt6.28□□□□□ -1.4
PTP3P40048 UBP12YJL197W 3765 nt6.28□□□□□ -1.4
PTP3P40048 MSH4YFL003C 2637 nt6.28□□□□□ -1.4
PTP3P40048 PEX11YOL147C 711 nt6.28□□□□□ -1.4
PTP3P40048 FUI1YBL042C 1920 nt6.28□□□□□ -1.4
PTP3P40048 FZO1YBR179C 2568 nt6.28□□□□□ -1.4
PTP3P40048 ABF1YKL112W 2196 nt6.28□□□□□ -1.4
PTP3P40048 LRE1YCL051W 1752 nt6.28□□□□□ -1.4
PTP3P40048 RSC3YDR303C 2658 nt6.28□□□□□ -1.4
PTP3P40048 YIL071W-AYIL071W-A 477 nt6.27□□□□□ -1.41
PTP3P40048 RPL14AYKL006W 417 nt6.27□□□□□ -1.41
PTP3P40048 MDM32YOR147W 1869 nt6.27□□□□□ -1.41
PTP3P40048 EMP70YLR083C 2004 nt6.26□□□□□ -1.41
PTP3P40048 POL1YNL102W 4407 nt6.26□□□□□ -1.41
PTP3P40048 YKL222CYKL222C 2118 nt6.26□□□□□ -1.41
PTP3P40048 EBS1YDR206W 2655 nt6.26□□□□□ -1.41
PTP3P40048 SNX41YDR425W 1878 nt6.26□□□□□ -1.41
PTP3P40048 YDR061WYDR061W 1620 nt6.26□□□□□ -1.41
PTP3P40048 FRE4YNR060W 2160 nt6.26□□□□□ -1.41
PTP3P40048 SSP1YHR184W 1716 nt6.26□□□□□ -1.41
PTP3P40048 YLR053CYLR053C 327 nt6.26□□□□□ -1.41
PTP3P40048 VPS5YOR069W 2028 nt6.26□□□□□ -1.41
PTP3P40048 PRR1YKL116C 1557 nt6.26□□□□□ -1.41
PTP3P40048 ASK10YGR097W 3441 nt6.25□□□□□ -1.41
PTP3P40048 YER188C-AYER188C-A 300 nt6.25□□□□□ -1.41
PTP3P40048 SMD1YGR074W 441 nt6.25□□□□□ -1.41
PTP3P40048 RPL14BYHL001W 417 nt6.25□□□□□ -1.41
PTP3P40048 YOR072W-AYOR072W-A 249 nt6.25□□□□□ -1.41
PTP3P40048 TUP1YCR084C 2142 nt6.24□□□□□ -1.41
PTP3P40048 YPL025CYPL025C 558 nt6.24□□□□□ -1.41
PTP3P40048 YPR169W-AYPR169W-A 219 nt6.24□□□□□ -1.41
PTP3P40048 YPR170W-BYPR170W-B 258 nt6.24□□□□□ -1.41
PTP3P40048 PBS2YJL128C 2007 nt6.24□□□□□ -1.41
PTP3P40048 NNK1YKL171W 2787 nt6.23□□□□□ -1.41
PTP3P40048 YDL011CYDL011C 324 nt6.23□□□□□ -1.41
PTP3P40048 RPC10YHR143W-A 213 nt6.23□□□□□ -1.41
PTP3P40048 YOL019W-AYOL019W-A 153 nt6.23□□□□□ -1.41
PTP3P40048 YOR381W-AYOR381W-A 168 nt6.23□□□□□ -1.41
PTP3P40048 SWD3YBR175W 948 nt6.23□□□□□ -1.41
PTP3P40048 HBT1YDL223C 3141 nt6.23□□□□□ -1.41
PTP3P40048 CAF4YKR036C 1932 nt6.23□□□□□ -1.41
PTP3P40048 RIM20YOR275C 1986 nt6.22□□□□□ -1.41
PTP3P40048 STB5YHR178W 2232 nt6.22□□□□□ -1.41
PTP3P40048 DAD4YDR320C-A 219 nt6.22□□□□□ -1.41
PTP3P40048 RPL37AYLR185W 267 nt6.22□□□□□ -1.41
PTP3P40048 CYB5YNL111C 363 nt6.22□□□□□ -1.41
PTP3P40048 PDC1YLR044C 1692 nt6.22□□□□□ -1.41
PTP3P40048 TRS85YDR108W 2097 nt6.22□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 10.3 ms