Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN6P29350 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
PTPN6P29350 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN6P29350 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN6P29350 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN6P29350 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PTPN6P29350 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN6P29350 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.62■□□□□ 0.73
PTPN6P29350 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN6P29350 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PTPN6P29350 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.61■□□□□ 0.73
PTPN6P29350 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.61■□□□□ 0.73
PTPN6P29350 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.61■□□□□ 0.73
PTPN6P29350 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTPN6P29350 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPN6P29350 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPN6P29350 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN6P29350 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN6P29350 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PTPN6P29350 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.6■□□□□ 0.73
PTPN6P29350 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN6P29350 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN6P29350 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.6■□□□□ 0.73
PTPN6P29350 AC053503.5-201ENST00000601508 636 ntBASIC19.6■□□□□ 0.73
PTPN6P29350 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN6P29350 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN6P29350 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PTPN6P29350 AC020907.5-201ENST00000624372 1936 ntBASIC19.6■□□□□ 0.73
PTPN6P29350 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PTPN6P29350 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PTPN6P29350 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.6■□□□□ 0.73
PTPN6P29350 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.6■□□□□ 0.73
PTPN6P29350 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTPN6P29350 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
PTPN6P29350 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN6P29350 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN6P29350 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN6P29350 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN6P29350 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN6P29350 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN6P29350 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PTPN6P29350 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN6P29350 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPN6P29350 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.59■□□□□ 0.73
PTPN6P29350 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.59■□□□□ 0.73
PTPN6P29350 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN6P29350 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN6P29350 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN6P29350 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PTPN6P29350 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN6P29350 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTPN6P29350 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPN6P29350 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.59■□□□□ 0.73
PTPN6P29350 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PTPN6P29350 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN6P29350 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN6P29350 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.58■□□□□ 0.73
PTPN6P29350 AL162377.1-201ENST00000618844 1793 ntBASIC19.58■□□□□ 0.73
PTPN6P29350 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
PTPN6P29350 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTPN6P29350 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN6P29350 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.72
PTPN6P29350 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.58■□□□□ 0.72
PTPN6P29350 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN6P29350 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PTPN6P29350 KRT18P5-201ENST00000436075 1291 ntBASIC19.58■□□□□ 0.72
PTPN6P29350 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PTPN6P29350 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN6P29350 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN6P29350 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.58■□□□□ 0.72
PTPN6P29350 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN6P29350 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN6P29350 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.58■□□□□ 0.72
PTPN6P29350 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.58■□□□□ 0.72
PTPN6P29350 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN6P29350 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN6P29350 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTPN6P29350 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
PTPN6P29350 AC061975.6-201ENST00000579045 1553 ntBASIC19.57■□□□□ 0.72
PTPN6P29350 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
PTPN6P29350 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN6P29350 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN6P29350 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PTPN6P29350 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms