Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.8■□□□□ 0.92
CTPS1P17812 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS1P17812 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS1P17812 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS1P17812 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS1P17812 AC006970.2-201ENST00000450065 779 ntBASIC20.8■□□□□ 0.92
CTPS1P17812 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS1P17812 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.8■□□□□ 0.92
CTPS1P17812 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.8■□□□□ 0.92
CTPS1P17812 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.8■□□□□ 0.92
CTPS1P17812 AL591742.1-201ENST00000604433 565 ntBASIC20.8■□□□□ 0.92
CTPS1P17812 AC016405.3-201ENST00000607710 860 ntBASIC20.8■□□□□ 0.92
CTPS1P17812 AL050303.2-201ENST00000619798 666 ntBASIC20.8■□□□□ 0.92
CTPS1P17812 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS1P17812 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CTPS1P17812 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.8■□□□□ 0.92
CTPS1P17812 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS1P17812 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.8■□□□□ 0.92
CTPS1P17812 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS1P17812 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTPS1P17812 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS1P17812 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS1P17812 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.79■□□□□ 0.92
CTPS1P17812 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS1P17812 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.79■□□□□ 0.92
CTPS1P17812 CYP2T1P-201ENST00000432607 1285 ntBASIC20.79■□□□□ 0.92
CTPS1P17812 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.79■□□□□ 0.92
CTPS1P17812 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS1P17812 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.79■□□□□ 0.92
CTPS1P17812 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CTPS1P17812 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTPS1P17812 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.79■□□□□ 0.92
CTPS1P17812 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CTPS1P17812 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CTPS1P17812 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.78■□□□□ 0.92
CTPS1P17812 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.78■□□□□ 0.92
CTPS1P17812 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS1P17812 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS1P17812 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS1P17812 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CTPS1P17812 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.78■□□□□ 0.92
CTPS1P17812 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS1P17812 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS1P17812 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.78■□□□□ 0.92
CTPS1P17812 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.78■□□□□ 0.92
CTPS1P17812 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.78■□□□□ 0.92
CTPS1P17812 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTPS1P17812 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CTPS1P17812 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.77■□□□□ 0.92
CTPS1P17812 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS1P17812 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.77■□□□□ 0.92
CTPS1P17812 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS1P17812 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS1P17812 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS1P17812 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS1P17812 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.77■□□□□ 0.92
CTPS1P17812 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CTPS1P17812 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CTPS1P17812 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.77■□□□□ 0.92
CTPS1P17812 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.77■□□□□ 0.92
CTPS1P17812 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.77■□□□□ 0.92
CTPS1P17812 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS1P17812 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS1P17812 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTPS1P17812 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTPS1P17812 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTPS1P17812 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
CTPS1P17812 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS1P17812 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS1P17812 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS1P17812 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CTPS1P17812 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.76■□□□□ 0.91
CTPS1P17812 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.76■□□□□ 0.91
CTPS1P17812 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CTPS1P17812 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.76■□□□□ 0.91
CTPS1P17812 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS1P17812 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.76■□□□□ 0.91
CTPS1P17812 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS1P17812 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS1P17812 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS1P17812 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.76■□□□□ 0.91
CTPS1P17812 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS1P17812 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS1P17812 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTPS1P17812 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.75■□□□□ 0.91
CTPS1P17812 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTPS1P17812 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTPS1P17812 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.75■□□□□ 0.91
CTPS1P17812 AC116050.2-201ENST00000612102 1779 ntBASIC20.75■□□□□ 0.91
CTPS1P17812 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTPS1P17812 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTPS1P17812 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.75■□□□□ 0.91
CTPS1P17812 AC007322.3-201ENST00000426526 701 ntBASIC20.75■□□□□ 0.91
CTPS1P17812 CDV3P1-201ENST00000471403 739 ntBASIC20.75■□□□□ 0.91
CTPS1P17812 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.75■□□□□ 0.91
CTPS1P17812 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.75■□□□□ 0.91
CTPS1P17812 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTPS1P17812 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTPS1P17812 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTPS1P17812 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms