Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT3P12035 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT3P12035 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT3P12035 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT3P12035 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
KRT3P12035 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.76■■□□□ 1.07
KRT3P12035 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
KRT3P12035 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT3P12035 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT3P12035 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT3P12035 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.76■■□□□ 1.07
KRT3P12035 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
KRT3P12035 UBE2DNL-204ENST00000602536 740 ntBASIC21.76■■□□□ 1.07
KRT3P12035 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT3P12035 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT3P12035 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
KRT3P12035 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT3P12035 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KRT3P12035 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
KRT3P12035 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT3P12035 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT3P12035 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT3P12035 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT3P12035 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.75■■□□□ 1.07
KRT3P12035 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.75■■□□□ 1.07
KRT3P12035 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.75■■□□□ 1.07
KRT3P12035 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT3P12035 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.75■■□□□ 1.07
KRT3P12035 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
KRT3P12035 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.75■■□□□ 1.07
KRT3P12035 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT3P12035 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
KRT3P12035 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT3P12035 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
KRT3P12035 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT3P12035 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KRT3P12035 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT3P12035 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT3P12035 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT3P12035 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT3P12035 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT3P12035 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT3P12035 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT3P12035 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.74■■□□□ 1.07
KRT3P12035 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT3P12035 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT3P12035 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT3P12035 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.74■■□□□ 1.07
KRT3P12035 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
KRT3P12035 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRT3P12035 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.74■■□□□ 1.07
KRT3P12035 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRT3P12035 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT3P12035 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
KRT3P12035 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRT3P12035 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.74■■□□□ 1.07
KRT3P12035 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
KRT3P12035 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRT3P12035 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT3P12035 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
KRT3P12035 RBM17P2-201ENST00000616397 1405 ntBASIC21.73■■□□□ 1.07
KRT3P12035 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT3P12035 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT3P12035 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.73■■□□□ 1.07
KRT3P12035 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT3P12035 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
KRT3P12035 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT3P12035 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT3P12035 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
KRT3P12035 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT3P12035 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.73■■□□□ 1.07
KRT3P12035 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT3P12035 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.73■■□□□ 1.07
KRT3P12035 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT3P12035 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.73■■□□□ 1.07
KRT3P12035 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.73■■□□□ 1.07
KRT3P12035 MIR5787-201ENST00000611784 55 ntBASIC21.73■■□□□ 1.07
KRT3P12035 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT3P12035 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.73■■□□□ 1.07
KRT3P12035 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT3P12035 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
KRT3P12035 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT3P12035 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
KRT3P12035 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT3P12035 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
KRT3P12035 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT3P12035 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT3P12035 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT3P12035 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT3P12035 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT3P12035 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
KRT3P12035 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.72■■□□□ 1.07
KRT3P12035 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT3P12035 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.72■■□□□ 1.07
KRT3P12035 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT3P12035 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT3P12035 AC243732.1-201ENST00000612648 864 ntBASIC21.72■■□□□ 1.07
KRT3P12035 MYCNOS-205ENST00000641950 531 ntBASIC21.72■■□□□ 1.07
KRT3P12035 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT3P12035 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms