Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.31■□□□□ 0.84
CAPN1P07384 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.31■□□□□ 0.84
CAPN1P07384 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.31■□□□□ 0.84
CAPN1P07384 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN1P07384 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.31■□□□□ 0.84
CAPN1P07384 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CAPN1P07384 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CAPN1P07384 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.31■□□□□ 0.84
CAPN1P07384 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN1P07384 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN1P07384 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN1P07384 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN1P07384 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CAPN1P07384 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN1P07384 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.31■□□□□ 0.84
CAPN1P07384 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
CAPN1P07384 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CAPN1P07384 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.3■□□□□ 0.84
CAPN1P07384 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN1P07384 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CAPN1P07384 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.3■□□□□ 0.84
CAPN1P07384 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.3■□□□□ 0.84
CAPN1P07384 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN1P07384 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN1P07384 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN1P07384 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN1P07384 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.3■□□□□ 0.84
CAPN1P07384 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN1P07384 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN1P07384 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN1P07384 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN1P07384 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CAPN1P07384 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN1P07384 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.29■□□□□ 0.84
CAPN1P07384 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN1P07384 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.29■□□□□ 0.84
CAPN1P07384 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CAPN1P07384 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN1P07384 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN1P07384 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.29■□□□□ 0.84
CAPN1P07384 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.29■□□□□ 0.84
CAPN1P07384 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.29■□□□□ 0.84
CAPN1P07384 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN1P07384 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CAPN1P07384 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CAPN1P07384 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.29■□□□□ 0.84
CAPN1P07384 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CAPN1P07384 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN1P07384 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.28■□□□□ 0.84
CAPN1P07384 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN1P07384 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN1P07384 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN1P07384 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.28■□□□□ 0.84
CAPN1P07384 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN1P07384 BID-214ENST00000617586 542 ntTSL 5 BASIC20.28■□□□□ 0.84
CAPN1P07384 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN1P07384 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN1P07384 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.28■□□□□ 0.84
CAPN1P07384 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CAPN1P07384 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.28■□□□□ 0.84
CAPN1P07384 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CAPN1P07384 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.27■□□□□ 0.84
CAPN1P07384 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN1P07384 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN1P07384 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.27■□□□□ 0.84
CAPN1P07384 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN1P07384 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN1P07384 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN1P07384 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CAPN1P07384 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN1P07384 KRT87P-202ENST00000534226 1464 ntBASIC20.27■□□□□ 0.84
CAPN1P07384 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN1P07384 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.27■□□□□ 0.84
CAPN1P07384 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.27■□□□□ 0.84
CAPN1P07384 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN1P07384 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.27■□□□□ 0.84
CAPN1P07384 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CAPN1P07384 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN1P07384 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CAPN1P07384 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CAPN1P07384 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CAPN1P07384 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CAPN1P07384 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CAPN1P07384 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN1P07384 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN1P07384 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CAPN1P07384 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.26■□□□□ 0.83
CAPN1P07384 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CAPN1P07384 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CAPN1P07384 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN1P07384 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CAPN1P07384 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN1P07384 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.26■□□□□ 0.83
CAPN1P07384 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN1P07384 AC104187.1-201ENST00000607510 612 ntBASIC20.26■□□□□ 0.83
CAPN1P07384 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.26■□□□□ 0.83
CAPN1P07384 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN1P07384 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CAPN1P07384 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CAPN1P07384 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms