Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CTSDP07339 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.15■□□□□ 0.34
CTSDP07339 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CTSDP07339 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
CTSDP07339 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.15■□□□□ 0.34
CTSDP07339 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CTSDP07339 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.15■□□□□ 0.34
CTSDP07339 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTSDP07339 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.14■□□□□ 0.34
CTSDP07339 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTSDP07339 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTSDP07339 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSDP07339 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.14■□□□□ 0.33
CTSDP07339 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSDP07339 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CTSDP07339 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.14■□□□□ 0.33
CTSDP07339 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.14■□□□□ 0.33
CTSDP07339 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.14■□□□□ 0.33
CTSDP07339 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.14■□□□□ 0.33
CTSDP07339 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.14■□□□□ 0.33
CTSDP07339 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.14■□□□□ 0.33
CTSDP07339 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTSDP07339 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.14■□□□□ 0.33
CTSDP07339 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTSDP07339 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSDP07339 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSDP07339 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSDP07339 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSDP07339 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSDP07339 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSDP07339 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSDP07339 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSDP07339 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSDP07339 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CTSDP07339 SLC47A1P1-202ENST00000449666 945 ntBASIC17.13■□□□□ 0.33
CTSDP07339 SMUG1P1-201ENST00000590640 811 ntBASIC17.13■□□□□ 0.33
CTSDP07339 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSDP07339 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSDP07339 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSDP07339 SMG8-203ENST00000578922 2178 ntBASIC17.13■□□□□ 0.33
CTSDP07339 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CTSDP07339 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTSDP07339 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.13■□□□□ 0.33
CTSDP07339 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CTSDP07339 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSDP07339 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSDP07339 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTSDP07339 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSDP07339 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSDP07339 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSDP07339 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSDP07339 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CTSDP07339 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CTSDP07339 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.12■□□□□ 0.33
CTSDP07339 BX005040.4-201ENST00000637145 1518 ntBASIC17.12■□□□□ 0.33
CTSDP07339 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSDP07339 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSDP07339 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CTSDP07339 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.12■□□□□ 0.33
CTSDP07339 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.12■□□□□ 0.33
CTSDP07339 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.12■□□□□ 0.33
CTSDP07339 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.12■□□□□ 0.33
CTSDP07339 MIR3621-201ENST00000580529 85 ntBASIC17.12■□□□□ 0.33
CTSDP07339 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSDP07339 AC136469.2-201ENST00000623944 1028 ntBASIC17.12■□□□□ 0.33
CTSDP07339 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.12■□□□□ 0.33
CTSDP07339 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.12■□□□□ 0.33
CTSDP07339 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTSDP07339 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSDP07339 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSDP07339 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.12■□□□□ 0.33
CTSDP07339 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CTSDP07339 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSDP07339 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTSDP07339 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.11■□□□□ 0.33
CTSDP07339 AC011484.1-201ENST00000377652 1995 ntBASIC17.11■□□□□ 0.33
CTSDP07339 SYT6-210ENST00000641643 1587 ntBASIC17.11■□□□□ 0.33
CTSDP07339 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.11■□□□□ 0.33
CTSDP07339 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSDP07339 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.11■□□□□ 0.33
CTSDP07339 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CTSDP07339 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTSDP07339 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSDP07339 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTSDP07339 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms