Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 RPN2YIL075C 2838 nt3.54□□□□□ -1.84
CDC9P04819 SWH1YAR042W 3567 nt3.54□□□□□ -1.84
CDC9P04819 BET3YKR068C 582 nt3.54□□□□□ -1.84
CDC9P04819 YML084WYML084W 309 nt3.54□□□□□ -1.84
CDC9P04819 YOL150CYOL150C 312 nt3.54□□□□□ -1.84
CDC9P04819 HEM4YOR278W 828 nt3.54□□□□□ -1.84
CDC9P04819 FAS1YKL182W 6156 nt3.54□□□□□ -1.84
CDC9P04819 GPI10YGL142C 1851 nt3.54□□□□□ -1.84
CDC9P04819 CWC22YGR278W 1734 nt3.53□□□□□ -1.84
CDC9P04819 YBR012W-AYBR012W-A 1323 nt3.53□□□□□ -1.84
CDC9P04819 YOR142W-AYOR142W-A 1323 nt3.53□□□□□ -1.84
CDC9P04819 YPR158W-AYPR158W-A 1323 nt3.53□□□□□ -1.84
CDC9P04819 KAP95YLR347C 2586 nt3.53□□□□□ -1.84
CDC9P04819 SWF1YDR126W 1011 nt3.53□□□□□ -1.84
CDC9P04819 RPL29YFR032C-A 180 nt3.53□□□□□ -1.84
CDC9P04819 YPS5YGL259W 498 nt3.53□□□□□ -1.84
CDC9P04819 YLR230WYLR230W 306 nt3.53□□□□□ -1.84
CDC9P04819 YLR269CYLR269C 351 nt3.53□□□□□ -1.84
CDC9P04819 YOR392WYOR392W 444 nt3.53□□□□□ -1.84
CDC9P04819 YBR285WYBR285W 435 nt3.53□□□□□ -1.84
CDC9P04819 YDR034C-DYDR034C-D 5313 nt3.52□□□□□ -1.85
CDC9P04819 ERG5YMR015C 1617 nt3.52□□□□□ -1.85
CDC9P04819 GLC7YER133W 939 nt3.52□□□□□ -1.85
CDC9P04819 YIL012WYIL012W 342 nt3.52□□□□□ -1.85
CDC9P04819 YKL066WYKL066W 444 nt3.52□□□□□ -1.85
CDC9P04819 RAD14YMR201C 1116 nt3.52□□□□□ -1.85
CDC9P04819 YBR032WYBR032W 303 nt3.52□□□□□ -1.85
CDC9P04819 RSC1YGR056W 2787 nt3.52□□□□□ -1.85
CDC9P04819 YHR214C-CYHR214C-C 1437 nt3.52□□□□□ -1.85
CDC9P04819 GPI17YDR434W 1605 nt3.52□□□□□ -1.85
CDC9P04819 BIT61YJL058C 1632 nt3.52□□□□□ -1.85
CDC9P04819 NOP4YPL043W 2058 nt3.51□□□□□ -1.85
CDC9P04819 TFB1YDR311W 1929 nt3.51□□□□□ -1.85
CDC9P04819 XRN1YGL173C 4587 nt3.51□□□□□ -1.85
CDC9P04819 YJR030CYJR030C 2238 nt3.51□□□□□ -1.85
CDC9P04819 YDR090CYDR090C 933 nt3.5□□□□□ -1.85
CDC9P04819 COX23YHR116W 456 nt3.5□□□□□ -1.85
CDC9P04819 YPL039WYPL039W 951 nt3.5□□□□□ -1.85
CDC9P04819 AVT2YEL064C 1443 nt3.5□□□□□ -1.85
CDC9P04819 SET1YHR119W 3243 nt3.49□□□□□ -1.85
CDC9P04819 RRN6YBL014C 2685 nt3.49□□□□□ -1.85
CDC9P04819 LRG1YDL240W 3054 nt3.49□□□□□ -1.85
CDC9P04819 ELM1YKL048C 1923 nt3.49□□□□□ -1.85
CDC9P04819 AAD3YCR107W 1092 nt3.49□□□□□ -1.85
CDC9P04819 ATG31YDR022C 591 nt3.49□□□□□ -1.85
CDC9P04819 tC(GCA)BtC(GCA)B 72 nt3.49□□□□□ -1.85
CDC9P04819 tC(GCA)GtC(GCA)G 72 nt3.49□□□□□ -1.85
CDC9P04819 tC(GCA)P1tC(GCA)P1 72 nt3.49□□□□□ -1.85
CDC9P04819 tC(GCA)P2tC(GCA)P2 72 nt3.49□□□□□ -1.85
CDC9P04819 REC104YHR157W 549 nt3.49□□□□□ -1.85
CDC9P04819 YLR287CYLR287C 1068 nt3.49□□□□□ -1.85
CDC9P04819 COQ5YML110C 924 nt3.49□□□□□ -1.85
CDC9P04819 TIM12YBR091C 330 nt3.49□□□□□ -1.85
CDC9P04819 CHD1YER164W 4407 nt3.48□□□□□ -1.85
CDC9P04819 KIN82YCR091W 2163 nt3.48□□□□□ -1.85
CDC9P04819 YDR194W-AYDR194W-A 153 nt3.48□□□□□ -1.85
CDC9P04819 YDR230WYDR230W 348 nt3.48□□□□□ -1.85
CDC9P04819 TIF35YDR429C 825 nt3.48□□□□□ -1.85
CDC9P04819 RAD6YGL058W 519 nt3.48□□□□□ -1.85
CDC9P04819 YGR121W-AYGR121W-A 216 nt3.48□□□□□ -1.85
CDC9P04819 RPL22AYLR061W 366 nt3.48□□□□□ -1.85
CDC9P04819 YOL134CYOL134C 390 nt3.48□□□□□ -1.85
CDC9P04819 SWD3YBR175W 948 nt3.48□□□□□ -1.85
CDC9P04819 GPX2YBR244W 489 nt3.48□□□□□ -1.85
CDC9P04819 GPI19YDR437W 423 nt3.47□□□□□ -1.85
CDC9P04819 YJR011CYJR011C 786 nt3.47□□□□□ -1.85
CDC9P04819 MYO3YKL129C 3819 nt3.47□□□□□ -1.85
CDC9P04819 LSM2YBL026W 288 nt3.47□□□□□ -1.85
CDC9P04819 EPL1YFL024C 2499 nt3.47□□□□□ -1.85
CDC9P04819 BFR1YOR198C 1413 nt3.46□□□□□ -1.86
CDC9P04819 MDV1YJL112W 2145 nt3.46□□□□□ -1.86
CDC9P04819 YNR065CYNR065C 3351 nt3.46□□□□□ -1.86
CDC9P04819 APC11YDL008W 498 nt3.46□□□□□ -1.86
CDC9P04819 VOA1YGR106C 798 nt3.46□□□□□ -1.86
CDC9P04819 LAG1YHL003C 1236 nt3.46□□□□□ -1.86
CDC9P04819 YPL197CYPL197C 414 nt3.46□□□□□ -1.86
CDC9P04819 PEX1YKL197C 3132 nt3.46□□□□□ -1.86
CDC9P04819 PES4YFR023W 1836 nt3.45□□□□□ -1.86
CDC9P04819 YNR063WYNR063W 1824 nt3.45□□□□□ -1.86
CDC9P04819 FAT1YBR041W 2010 nt3.45□□□□□ -1.86
CDC9P04819 YDL071CYDL071C 375 nt3.45□□□□□ -1.86
CDC9P04819 YER066C-AYER066C-A 501 nt3.45□□□□□ -1.86
CDC9P04819 YER068C-AYER068C-A 432 nt3.45□□□□□ -1.86
CDC9P04819 YGL165CYGL165C 579 nt3.45□□□□□ -1.86
CDC9P04819 TEN1YLR010C 483 nt3.45□□□□□ -1.86
CDC9P04819 RPL37AYLR185W 267 nt3.45□□□□□ -1.86
CDC9P04819 SIP18YMR175W 240 nt3.45□□□□□ -1.86
CDC9P04819 ISU1YPL135W 498 nt3.45□□□□□ -1.86
CDC9P04819 TSC3YBR058C-A 243 nt3.45□□□□□ -1.86
CDC9P04819 VHR2YER064C 1518 nt3.44□□□□□ -1.86
CDC9P04819 TRZ1YKR079C 2517 nt3.44□□□□□ -1.86
CDC9P04819 SMC2YFR031C 3513 nt3.44□□□□□ -1.86
CDC9P04819 ATG26YLR189C 3597 nt3.44□□□□□ -1.86
CDC9P04819 RNH70YGR276C 1662 nt3.44□□□□□ -1.86
CDC9P04819 RRT13YER066W 558 nt3.44□□□□□ -1.86
CDC9P04819 CRG1YHR209W 876 nt3.44□□□□□ -1.86
CDC9P04819 HIT1YJR055W 495 nt3.44□□□□□ -1.86
CDC9P04819 PAU23YLR037C 375 nt3.44□□□□□ -1.86
CDC9P04819 DGK1YOR311C 873 nt3.44□□□□□ -1.86
CDC9P04819 snR191snR191 274 nt3.44□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 30.2 ms