Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPNS1P04632 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.54■□□□□ 0.88
CAPNS1P04632 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPNS1P04632 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPNS1P04632 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.54■□□□□ 0.88
CAPNS1P04632 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.54■□□□□ 0.88
CAPNS1P04632 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.54■□□□□ 0.88
CAPNS1P04632 AC006058.3-201ENST00000606217 1069 ntBASIC20.54■□□□□ 0.88
CAPNS1P04632 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CAPNS1P04632 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPNS1P04632 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPNS1P04632 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPNS1P04632 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPNS1P04632 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPNS1P04632 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPNS1P04632 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CAPNS1P04632 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CAPNS1P04632 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPNS1P04632 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.53■□□□□ 0.88
CAPNS1P04632 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CAPNS1P04632 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPNS1P04632 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.53■□□□□ 0.88
CAPNS1P04632 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPNS1P04632 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPNS1P04632 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CAPNS1P04632 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CAPNS1P04632 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPNS1P04632 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPNS1P04632 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.53■□□□□ 0.88
CAPNS1P04632 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.53■□□□□ 0.88
CAPNS1P04632 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPNS1P04632 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CAPNS1P04632 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CAPNS1P04632 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPNS1P04632 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CAPNS1P04632 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.53■□□□□ 0.88
CAPNS1P04632 MKRN4P-201ENST00000444706 1521 ntBASIC20.53■□□□□ 0.88
CAPNS1P04632 AC068338.2-201ENST00000563278 1430 ntBASIC20.53■□□□□ 0.88
CAPNS1P04632 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CAPNS1P04632 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPNS1P04632 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CAPNS1P04632 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPNS1P04632 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPNS1P04632 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CAPNS1P04632 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.52■□□□□ 0.88
CAPNS1P04632 ECEL1P3-201ENST00000427961 737 ntBASIC20.52■□□□□ 0.88
CAPNS1P04632 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.52■□□□□ 0.88
CAPNS1P04632 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPNS1P04632 UNC93B4-201ENST00000505679 747 ntBASIC20.52■□□□□ 0.88
CAPNS1P04632 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.52■□□□□ 0.88
CAPNS1P04632 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.52■□□□□ 0.88
CAPNS1P04632 FEM1AP4-201ENST00000443167 1987 ntBASIC20.52■□□□□ 0.87
CAPNS1P04632 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.52■□□□□ 0.87
CAPNS1P04632 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPNS1P04632 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPNS1P04632 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPNS1P04632 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPNS1P04632 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPNS1P04632 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
CAPNS1P04632 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CAPNS1P04632 AC008550.1-201ENST00000511500 884 ntBASIC20.51■□□□□ 0.87
CAPNS1P04632 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.51■□□□□ 0.87
CAPNS1P04632 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CAPNS1P04632 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.51■□□□□ 0.87
CAPNS1P04632 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.51■□□□□ 0.87
CAPNS1P04632 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPNS1P04632 AC010331.1-201ENST00000611423 582 ntBASIC20.51■□□□□ 0.87
CAPNS1P04632 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPNS1P04632 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
CAPNS1P04632 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPNS1P04632 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.51■□□□□ 0.87
CAPNS1P04632 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPNS1P04632 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CAPNS1P04632 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPNS1P04632 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CAPNS1P04632 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPNS1P04632 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPNS1P04632 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
CAPNS1P04632 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPNS1P04632 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPNS1P04632 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CAPNS1P04632 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.5■□□□□ 0.87
CAPNS1P04632 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.5■□□□□ 0.87
CAPNS1P04632 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPNS1P04632 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPNS1P04632 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.5■□□□□ 0.87
CAPNS1P04632 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CAPNS1P04632 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.5■□□□□ 0.87
CAPNS1P04632 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPNS1P04632 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CAPNS1P04632 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CAPNS1P04632 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPNS1P04632 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPNS1P04632 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPNS1P04632 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPNS1P04632 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPNS1P04632 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CAPNS1P04632 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPNS1P04632 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CAPNS1P04632 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms