Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.47■□□□□ 0.87
SOD1P00441 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.47■□□□□ 0.87
SOD1P00441 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.47■□□□□ 0.87
SOD1P00441 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SOD1P00441 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SOD1P00441 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.47■□□□□ 0.87
SOD1P00441 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.47■□□□□ 0.87
SOD1P00441 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOD1P00441 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOD1P00441 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOD1P00441 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SOD1P00441 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SOD1P00441 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SOD1P00441 AF106564.1-201ENST00000607058 2553 ntBASIC20.46■□□□□ 0.87
SOD1P00441 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SOD1P00441 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.46■□□□□ 0.87
SOD1P00441 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SOD1P00441 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.46■□□□□ 0.87
SOD1P00441 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.46■□□□□ 0.87
SOD1P00441 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.46■□□□□ 0.87
SOD1P00441 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SOD1P00441 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.46■□□□□ 0.87
SOD1P00441 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.46■□□□□ 0.87
SOD1P00441 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.46■□□□□ 0.87
SOD1P00441 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.46■□□□□ 0.87
SOD1P00441 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SOD1P00441 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SOD1P00441 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SOD1P00441 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SOD1P00441 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SOD1P00441 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SOD1P00441 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SOD1P00441 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.45■□□□□ 0.86
SOD1P00441 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.45■□□□□ 0.86
SOD1P00441 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SOD1P00441 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.45■□□□□ 0.86
SOD1P00441 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.45■□□□□ 0.86
SOD1P00441 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOD1P00441 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOD1P00441 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOD1P00441 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SOD1P00441 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SOD1P00441 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SOD1P00441 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.45■□□□□ 0.86
SOD1P00441 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SOD1P00441 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SOD1P00441 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SOD1P00441 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.44■□□□□ 0.86
SOD1P00441 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
SOD1P00441 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SOD1P00441 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SOD1P00441 AC100791.3-201ENST00000617619 330 ntBASIC20.44■□□□□ 0.86
SOD1P00441 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.44■□□□□ 0.86
SOD1P00441 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SOD1P00441 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.44■□□□□ 0.86
SOD1P00441 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.44■□□□□ 0.86
SOD1P00441 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SOD1P00441 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.43■□□□□ 0.86
SOD1P00441 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SOD1P00441 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SOD1P00441 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
SOD1P00441 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SOD1P00441 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SOD1P00441 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SOD1P00441 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SOD1P00441 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.43■□□□□ 0.86
SOD1P00441 AL355472.2-201ENST00000422958 438 ntBASIC20.43■□□□□ 0.86
SOD1P00441 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.43■□□□□ 0.86
SOD1P00441 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.43■□□□□ 0.86
SOD1P00441 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SOD1P00441 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
SOD1P00441 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
SOD1P00441 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOD1P00441 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOD1P00441 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOD1P00441 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SOD1P00441 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOD1P00441 BX276092.2-201ENST00000417668 665 ntBASIC20.42■□□□□ 0.86
SOD1P00441 AC073210.2-201ENST00000430369 194 ntBASIC20.42■□□□□ 0.86
SOD1P00441 AC069152.1-201ENST00000438030 544 ntBASIC20.42■□□□□ 0.86
SOD1P00441 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.42■□□□□ 0.86
SOD1P00441 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.42■□□□□ 0.86
SOD1P00441 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.42■□□□□ 0.86
SOD1P00441 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOD1P00441 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SOD1P00441 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOD1P00441 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.42■□□□□ 0.86
SOD1P00441 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SOD1P00441 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SOD1P00441 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SOD1P00441 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SOD1P00441 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOD1P00441 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SOD1P00441 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOD1P00441 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOD1P00441 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SOD1P00441 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.41■□□□□ 0.86
SOD1P00441 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SOD1P00441 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.41■□□□□ 0.86
SOD1P00441 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms