Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT4O95628 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT4O95628 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT4O95628 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.34■□□□□ 0.53
CNOT4O95628 AC008694.1-202ENST00000636953 945 ntBASIC18.34■□□□□ 0.53
CNOT4O95628 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT4O95628 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.34■□□□□ 0.53
CNOT4O95628 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.34■□□□□ 0.53
CNOT4O95628 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CNOT4O95628 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT4O95628 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CNOT4O95628 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT4O95628 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.33■□□□□ 0.53
CNOT4O95628 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.33■□□□□ 0.53
CNOT4O95628 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.33■□□□□ 0.53
CNOT4O95628 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT4O95628 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT4O95628 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.33■□□□□ 0.53
CNOT4O95628 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT4O95628 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.33■□□□□ 0.52
CNOT4O95628 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT4O95628 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT4O95628 AL512625.2-201ENST00000417533 625 ntBASIC18.33■□□□□ 0.52
CNOT4O95628 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT4O95628 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT4O95628 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
CNOT4O95628 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.33■□□□□ 0.52
CNOT4O95628 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT4O95628 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT4O95628 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT4O95628 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT4O95628 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT4O95628 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT4O95628 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT4O95628 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.32■□□□□ 0.52
CNOT4O95628 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT4O95628 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT4O95628 AC091799.1-201ENST00000422823 811 ntBASIC18.32■□□□□ 0.52
CNOT4O95628 CDV3P1-201ENST00000471403 739 ntBASIC18.32■□□□□ 0.52
CNOT4O95628 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT4O95628 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT4O95628 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CNOT4O95628 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT4O95628 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT4O95628 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT4O95628 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNOT4O95628 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT4O95628 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT4O95628 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT4O95628 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.31■□□□□ 0.52
CNOT4O95628 CYP2T1P-201ENST00000432607 1285 ntBASIC18.31■□□□□ 0.52
CNOT4O95628 TSPY20P-201ENST00000450910 630 ntBASIC18.31■□□□□ 0.52
CNOT4O95628 AF201337.1-201ENST00000520239 748 ntBASIC18.31■□□□□ 0.52
CNOT4O95628 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.31■□□□□ 0.52
CNOT4O95628 FAM21FP-204ENST00000608637 956 ntBASIC18.31■□□□□ 0.52
CNOT4O95628 AL050303.2-201ENST00000619798 666 ntBASIC18.31■□□□□ 0.52
CNOT4O95628 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.31■□□□□ 0.52
CNOT4O95628 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT4O95628 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT4O95628 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT4O95628 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT4O95628 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.31■□□□□ 0.52
CNOT4O95628 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT4O95628 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT4O95628 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT4O95628 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT4O95628 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT4O95628 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.31■□□□□ 0.52
CNOT4O95628 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNOT4O95628 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT4O95628 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT4O95628 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CNOT4O95628 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT4O95628 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT4O95628 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT4O95628 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CNOT4O95628 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.3■□□□□ 0.52
CNOT4O95628 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT4O95628 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CNOT4O95628 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.3■□□□□ 0.52
CNOT4O95628 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CNOT4O95628 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT4O95628 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT4O95628 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT4O95628 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT4O95628 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT4O95628 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT4O95628 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.3■□□□□ 0.52
CNOT4O95628 AC142086.2-201ENST00000569753 217 ntBASIC18.3■□□□□ 0.52
CNOT4O95628 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CNOT4O95628 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT4O95628 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT4O95628 AC066615.1-201ENST00000640911 628 ntBASIC18.3■□□□□ 0.52
CNOT4O95628 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CNOT4O95628 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT4O95628 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT4O95628 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CNOT4O95628 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT4O95628 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT4O95628 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms