Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SEMA3DO95025 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
SEMA3DO95025 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SEMA3DO95025 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3DO95025 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SEMA3DO95025 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SEMA3DO95025 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3DO95025 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SEMA3DO95025 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.76■□□□□ 0.75
SEMA3DO95025 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3DO95025 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3DO95025 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.76■□□□□ 0.75
SEMA3DO95025 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.76■□□□□ 0.75
SEMA3DO95025 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.76■□□□□ 0.75
SEMA3DO95025 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.76■□□□□ 0.75
SEMA3DO95025 NTF6G-201ENST00000591094 616 ntBASIC19.76■□□□□ 0.75
SEMA3DO95025 AC243732.1-201ENST00000612648 864 ntBASIC19.76■□□□□ 0.75
SEMA3DO95025 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.76■□□□□ 0.75
SEMA3DO95025 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.76■□□□□ 0.75
SEMA3DO95025 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.76■□□□□ 0.75
SEMA3DO95025 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3DO95025 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3DO95025 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3DO95025 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3DO95025 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA3DO95025 AC019069.1-201ENST00000610008 1333 ntBASIC19.76■□□□□ 0.75
SEMA3DO95025 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3DO95025 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
SEMA3DO95025 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3DO95025 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.75■□□□□ 0.75
SEMA3DO95025 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3DO95025 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3DO95025 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
SEMA3DO95025 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3DO95025 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3DO95025 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3DO95025 AC087623.3-201ENST00000607047 1098 ntBASIC19.75■□□□□ 0.75
SEMA3DO95025 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3DO95025 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA3DO95025 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.75■□□□□ 0.75
SEMA3DO95025 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
SEMA3DO95025 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SEMA3DO95025 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SEMA3DO95025 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3DO95025 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
SEMA3DO95025 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SEMA3DO95025 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.74■□□□□ 0.75
SEMA3DO95025 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3DO95025 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SEMA3DO95025 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3DO95025 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3DO95025 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SEMA3DO95025 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.74■□□□□ 0.75
SEMA3DO95025 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SEMA3DO95025 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3DO95025 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3DO95025 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3DO95025 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.74■□□□□ 0.75
SEMA3DO95025 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3DO95025 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SEMA3DO95025 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3DO95025 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA3DO95025 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.73■□□□□ 0.75
SEMA3DO95025 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3DO95025 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3DO95025 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SEMA3DO95025 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3DO95025 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3DO95025 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3DO95025 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3DO95025 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.73■□□□□ 0.75
SEMA3DO95025 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3DO95025 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.73■□□□□ 0.75
SEMA3DO95025 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SEMA3DO95025 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3DO95025 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3DO95025 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3DO95025 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3DO95025 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.73■□□□□ 0.75
SEMA3DO95025 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3DO95025 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA3DO95025 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3DO95025 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3DO95025 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3DO95025 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3DO95025 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SEMA3DO95025 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SEMA3DO95025 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3DO95025 AC026271.2-201ENST00000428091 497 ntBASIC19.72■□□□□ 0.75
SEMA3DO95025 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.72■□□□□ 0.75
SEMA3DO95025 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.72■□□□□ 0.75
SEMA3DO95025 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.72■□□□□ 0.75
SEMA3DO95025 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.72■□□□□ 0.75
SEMA3DO95025 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3DO95025 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.72■□□□□ 0.75
SEMA3DO95025 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.72■□□□□ 0.75
SEMA3DO95025 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
SEMA3DO95025 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3DO95025 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEMA3DO95025 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms