Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNRNP200O75643 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNRNP200O75643 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.85■□□□□ 0.77
SNRNP200O75643 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNRNP200O75643 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.85■□□□□ 0.77
SNRNP200O75643 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.85■□□□□ 0.77
SNRNP200O75643 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SNRNP200O75643 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
SNRNP200O75643 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNRNP200O75643 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNRNP200O75643 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
SNRNP200O75643 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNRNP200O75643 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.85■□□□□ 0.77
SNRNP200O75643 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.85■□□□□ 0.77
SNRNP200O75643 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SNRNP200O75643 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.85■□□□□ 0.77
SNRNP200O75643 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.84■□□□□ 0.77
SNRNP200O75643 AC005229.4-201ENST00000610085 2198 ntBASIC19.84■□□□□ 0.77
SNRNP200O75643 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SNRNP200O75643 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SNRNP200O75643 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.84■□□□□ 0.77
SNRNP200O75643 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.84■□□□□ 0.77
SNRNP200O75643 AL356652.1-201ENST00000615962 565 ntBASIC19.84■□□□□ 0.77
SNRNP200O75643 OR10C1-204ENST00000622521 1039 ntBASIC19.84■□□□□ 0.77
SNRNP200O75643 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.84■□□□□ 0.77
SNRNP200O75643 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP200O75643 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP200O75643 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP200O75643 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP200O75643 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.84■□□□□ 0.77
SNRNP200O75643 AL137060.1-201ENST00000618151 2648 ntBASIC19.84■□□□□ 0.77
SNRNP200O75643 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.84■□□□□ 0.77
SNRNP200O75643 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP200O75643 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP200O75643 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.84■□□□□ 0.77
SNRNP200O75643 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.84■□□□□ 0.77
SNRNP200O75643 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP200O75643 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.84■□□□□ 0.77
SNRNP200O75643 AC105036.2-201ENST00000569468 176 ntBASIC19.84■□□□□ 0.77
SNRNP200O75643 AC069236.1-201ENST00000604339 616 ntBASIC19.84■□□□□ 0.77
SNRNP200O75643 AL121832.2-201ENST00000610979 668 ntBASIC19.84■□□□□ 0.77
SNRNP200O75643 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNRNP200O75643 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNRNP200O75643 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNRNP200O75643 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNRNP200O75643 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SNRNP200O75643 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SNRNP200O75643 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.83■□□□□ 0.77
SNRNP200O75643 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.83■□□□□ 0.77
SNRNP200O75643 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNRNP200O75643 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.83■□□□□ 0.77
SNRNP200O75643 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.83■□□□□ 0.77
SNRNP200O75643 AC083906.2-201ENST00000511578 360 ntBASIC19.83■□□□□ 0.77
SNRNP200O75643 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.83■□□□□ 0.77
SNRNP200O75643 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNRNP200O75643 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.83■□□□□ 0.76
SNRNP200O75643 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNRNP200O75643 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.83■□□□□ 0.76
SNRNP200O75643 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
SNRNP200O75643 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SNRNP200O75643 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP200O75643 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP200O75643 AL512625.2-201ENST00000417533 625 ntBASIC19.82■□□□□ 0.76
SNRNP200O75643 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.82■□□□□ 0.76
SNRNP200O75643 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.82■□□□□ 0.76
SNRNP200O75643 AL591742.1-201ENST00000604433 565 ntBASIC19.82■□□□□ 0.76
SNRNP200O75643 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SNRNP200O75643 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP200O75643 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.82■□□□□ 0.76
SNRNP200O75643 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP200O75643 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP200O75643 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP200O75643 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SNRNP200O75643 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.82■□□□□ 0.76
SNRNP200O75643 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP200O75643 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.82■□□□□ 0.76
SNRNP200O75643 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP200O75643 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.82■□□□□ 0.76
SNRNP200O75643 BX276092.2-201ENST00000417668 665 ntBASIC19.82■□□□□ 0.76
SNRNP200O75643 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.82■□□□□ 0.76
SNRNP200O75643 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.82■□□□□ 0.76
SNRNP200O75643 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNRNP200O75643 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.82■□□□□ 0.76
SNRNP200O75643 KRT17P1-201ENST00000399211 1546 ntBASIC19.81■□□□□ 0.76
SNRNP200O75643 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP200O75643 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP200O75643 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP200O75643 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP200O75643 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP200O75643 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP200O75643 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.81■□□□□ 0.76
SNRNP200O75643 RARRES2P4-201ENST00000514074 484 ntBASIC19.81■□□□□ 0.76
SNRNP200O75643 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.81■□□□□ 0.76
SNRNP200O75643 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP200O75643 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.81■□□□□ 0.76
SNRNP200O75643 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.81■□□□□ 0.76
SNRNP200O75643 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP200O75643 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.81■□□□□ 0.76
SNRNP200O75643 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNRNP200O75643 AC093787.1-201ENST00000450396 207 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms