Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ZNF253O75346 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF253O75346 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.03■□□□□ 0.16
ZNF253O75346 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
ZNF253O75346 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF253O75346 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.02■□□□□ 0.16
ZNF253O75346 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF253O75346 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF253O75346 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF253O75346 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF253O75346 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF253O75346 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF253O75346 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF253O75346 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.02■□□□□ 0.16
ZNF253O75346 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF253O75346 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF253O75346 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF253O75346 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF253O75346 SLC47A1P1-202ENST00000449666 945 ntBASIC16.02■□□□□ 0.16
ZNF253O75346 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF253O75346 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.02■□□□□ 0.16
ZNF253O75346 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF253O75346 HCG11-201ENST00000411553 5696 ntBASIC16.02■□□□□ 0.15
ZNF253O75346 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF253O75346 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF253O75346 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.02■□□□□ 0.15
ZNF253O75346 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF253O75346 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF253O75346 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF253O75346 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF253O75346 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF253O75346 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.02■□□□□ 0.15
ZNF253O75346 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
ZNF253O75346 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF253O75346 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF253O75346 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF253O75346 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ZNF253O75346 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF253O75346 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF253O75346 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF253O75346 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ZNF253O75346 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
ZNF253O75346 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.01■□□□□ 0.15
ZNF253O75346 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF253O75346 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF253O75346 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF253O75346 AIRN-201ENST00000601203 4374 ntBASIC16.01■□□□□ 0.15
ZNF253O75346 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF253O75346 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
ZNF253O75346 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF253O75346 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF253O75346 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF253O75346 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF253O75346 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF253O75346 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF253O75346 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16■□□□□ 0.15
ZNF253O75346 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
ZNF253O75346 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16■□□□□ 0.15
ZNF253O75346 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16■□□□□ 0.15
ZNF253O75346 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16■□□□□ 0.15
ZNF253O75346 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF253O75346 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF253O75346 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF253O75346 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF253O75346 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16■□□□□ 0.15
ZNF253O75346 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF253O75346 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16■□□□□ 0.15
ZNF253O75346 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16■□□□□ 0.15
ZNF253O75346 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16■□□□□ 0.15
ZNF253O75346 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
ZNF253O75346 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16■□□□□ 0.15
ZNF253O75346 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16■□□□□ 0.15
ZNF253O75346 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16■□□□□ 0.15
ZNF253O75346 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16■□□□□ 0.15
ZNF253O75346 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16■□□□□ 0.15
ZNF253O75346 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16■□□□□ 0.15
ZNF253O75346 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16■□□□□ 0.15
ZNF253O75346 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
ZNF253O75346 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF253O75346 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16■□□□□ 0.15
ZNF253O75346 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF253O75346 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16■□□□□ 0.15
ZNF253O75346 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF253O75346 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF253O75346 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16■□□□□ 0.15
ZNF253O75346 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ZNF253O75346 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF253O75346 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
ZNF253O75346 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16■□□□□ 0.15
ZNF253O75346 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ZNF253O75346 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16■□□□□ 0.15
ZNF253O75346 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.99■□□□□ 0.15
ZNF253O75346 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF253O75346 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF253O75346 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
ZNF253O75346 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms