Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF13O43567 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF13O43567 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF13O43567 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF13O43567 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RNF13O43567 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF13O43567 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF13O43567 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RNF13O43567 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF13O43567 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
RNF13O43567 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF13O43567 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF13O43567 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.77■□□□□ 0.6
RNF13O43567 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF13O43567 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF13O43567 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF13O43567 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF13O43567 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF13O43567 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF13O43567 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF13O43567 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RNF13O43567 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF13O43567 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF13O43567 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF13O43567 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RNF13O43567 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF13O43567 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF13O43567 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF13O43567 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RNF13O43567 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF13O43567 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
RNF13O43567 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF13O43567 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF13O43567 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF13O43567 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF13O43567 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF13O43567 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RNF13O43567 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF13O43567 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF13O43567 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF13O43567 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF13O43567 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF13O43567 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF13O43567 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF13O43567 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF13O43567 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF13O43567 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF13O43567 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF13O43567 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
RNF13O43567 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF13O43567 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF13O43567 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF13O43567 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF13O43567 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF13O43567 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF13O43567 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.75■□□□□ 0.59
RNF13O43567 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF13O43567 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.75■□□□□ 0.59
RNF13O43567 AC008175.2-201ENST00000612840 297 ntBASIC18.75■□□□□ 0.59
RNF13O43567 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF13O43567 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RNF13O43567 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF13O43567 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF13O43567 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF13O43567 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF13O43567 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF13O43567 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RNF13O43567 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF13O43567 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF13O43567 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF13O43567 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
RNF13O43567 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF13O43567 AP004607.4-201ENST00000530158 1459 ntBASIC18.74■□□□□ 0.59
RNF13O43567 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF13O43567 AC123595.1-201ENST00000440769 1046 ntBASIC18.74■□□□□ 0.59
RNF13O43567 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.74■□□□□ 0.59
RNF13O43567 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF13O43567 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF13O43567 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF13O43567 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF13O43567 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF13O43567 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF13O43567 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF13O43567 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RNF13O43567 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RNF13O43567 AC061975.6-201ENST00000579045 1553 ntBASIC18.73■□□□□ 0.59
RNF13O43567 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF13O43567 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
RNF13O43567 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF13O43567 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF13O43567 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF13O43567 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RNF13O43567 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RNF13O43567 ZNRF2P3-201ENST00000424200 374 ntBASIC18.73■□□□□ 0.59
RNF13O43567 YBX1P1-201ENST00000445822 960 ntBASIC18.73■□□□□ 0.59
RNF13O43567 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF13O43567 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF13O43567 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF13O43567 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF13O43567 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms