Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SGCEO43556 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGCEO43556 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SGCEO43556 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SGCEO43556 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.22■□□□□ 0.51
SGCEO43556 KRT16P2-201ENST00000414673 1423 ntBASIC18.22■□□□□ 0.51
SGCEO43556 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SGCEO43556 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SGCEO43556 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.21■□□□□ 0.51
SGCEO43556 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SGCEO43556 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
SGCEO43556 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SGCEO43556 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.21■□□□□ 0.51
SGCEO43556 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.21■□□□□ 0.51
SGCEO43556 MIR6821-201ENST00000617625 74 ntBASIC18.21■□□□□ 0.51
SGCEO43556 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SGCEO43556 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SGCEO43556 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SGCEO43556 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SGCEO43556 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SGCEO43556 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SGCEO43556 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SGCEO43556 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.2■□□□□ 0.5
SGCEO43556 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SGCEO43556 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.2■□□□□ 0.5
SGCEO43556 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SGCEO43556 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.2■□□□□ 0.5
SGCEO43556 KRT19P1-201ENST00000405746 1186 ntBASIC18.2■□□□□ 0.5
SGCEO43556 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SGCEO43556 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SGCEO43556 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.2■□□□□ 0.5
SGCEO43556 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.2■□□□□ 0.5
SGCEO43556 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.2■□□□□ 0.5
SGCEO43556 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SGCEO43556 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.2■□□□□ 0.5
SGCEO43556 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SGCEO43556 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SGCEO43556 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SGCEO43556 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SGCEO43556 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SGCEO43556 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SGCEO43556 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SGCEO43556 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.19■□□□□ 0.5
SGCEO43556 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SGCEO43556 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.19■□□□□ 0.5
SGCEO43556 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SGCEO43556 KRT18P20-201ENST00000548986 1279 ntBASIC18.19■□□□□ 0.5
SGCEO43556 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SGCEO43556 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SGCEO43556 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SGCEO43556 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
SGCEO43556 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SGCEO43556 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SGCEO43556 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.18■□□□□ 0.5
SGCEO43556 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.18■□□□□ 0.5
SGCEO43556 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.18■□□□□ 0.5
SGCEO43556 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.18■□□□□ 0.5
SGCEO43556 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.18■□□□□ 0.5
SGCEO43556 AC087623.3-201ENST00000607047 1098 ntBASIC18.18■□□□□ 0.5
SGCEO43556 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.18■□□□□ 0.5
SGCEO43556 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SGCEO43556 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SGCEO43556 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SGCEO43556 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SGCEO43556 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SGCEO43556 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SGCEO43556 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms