Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PHF1O43189 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.79■□□□□ 0.44
PHF1O43189 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.79■□□□□ 0.44
PHF1O43189 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.79■□□□□ 0.44
PHF1O43189 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PHF1O43189 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.79■□□□□ 0.44
PHF1O43189 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
PHF1O43189 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PHF1O43189 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PHF1O43189 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PHF1O43189 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
PHF1O43189 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.78■□□□□ 0.44
PHF1O43189 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PHF1O43189 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PHF1O43189 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.78■□□□□ 0.44
PHF1O43189 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.78■□□□□ 0.44
PHF1O43189 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.78■□□□□ 0.44
PHF1O43189 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.78■□□□□ 0.44
PHF1O43189 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.78■□□□□ 0.44
PHF1O43189 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PHF1O43189 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHF1O43189 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PHF1O43189 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.77■□□□□ 0.44
PHF1O43189 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.77■□□□□ 0.44
PHF1O43189 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PHF1O43189 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PHF1O43189 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHF1O43189 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PHF1O43189 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PHF1O43189 AC083906.2-201ENST00000511578 360 ntBASIC17.77■□□□□ 0.44
PHF1O43189 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.77■□□□□ 0.44
PHF1O43189 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHF1O43189 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PHF1O43189 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHF1O43189 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PHF1O43189 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHF1O43189 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHF1O43189 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHF1O43189 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHF1O43189 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PHF1O43189 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHF1O43189 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PHF1O43189 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.76■□□□□ 0.43
PHF1O43189 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHF1O43189 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.76■□□□□ 0.43
PHF1O43189 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHF1O43189 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHF1O43189 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHF1O43189 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.76■□□□□ 0.43
PHF1O43189 TSPY6P-201ENST00000448518 926 ntBASIC17.76■□□□□ 0.43
PHF1O43189 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PHF1O43189 AL034346.1-201ENST00000568244 1277 ntBASIC17.76■□□□□ 0.43
PHF1O43189 AC008687.6-201ENST00000596318 630 ntBASIC17.76■□□□□ 0.43
PHF1O43189 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.76■□□□□ 0.43
PHF1O43189 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.76■□□□□ 0.43
PHF1O43189 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHF1O43189 AC055733.4-201ENST00000638462 1354 ntBASIC17.76■□□□□ 0.43
PHF1O43189 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PHF1O43189 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PHF1O43189 KRT87P-202ENST00000534226 1464 ntBASIC17.75■□□□□ 0.43
PHF1O43189 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHF1O43189 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHF1O43189 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHF1O43189 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHF1O43189 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PHF1O43189 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PHF1O43189 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHF1O43189 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHF1O43189 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHF1O43189 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.75■□□□□ 0.43
PHF1O43189 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.75■□□□□ 0.43
PHF1O43189 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.75■□□□□ 0.43
PHF1O43189 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.75■□□□□ 0.43
PHF1O43189 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.75■□□□□ 0.43
PHF1O43189 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHF1O43189 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PHF1O43189 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHF1O43189 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PHF1O43189 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.75■□□□□ 0.43
PHF1O43189 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PHF1O43189 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHF1O43189 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHF1O43189 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.75■□□□□ 0.43
PHF1O43189 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PHF1O43189 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms