Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.81■□□□□ 0.76
NDUFS4O43181 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS4O43181 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS4O43181 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDUFS4O43181 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.8■□□□□ 0.76
NDUFS4O43181 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.8■□□□□ 0.76
NDUFS4O43181 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.8■□□□□ 0.76
NDUFS4O43181 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.8■□□□□ 0.76
NDUFS4O43181 DUX4L16-201ENST00000555130 1264 ntBASIC19.8■□□□□ 0.76
NDUFS4O43181 AC080038.1-201ENST00000611274 1154 ntBASIC19.8■□□□□ 0.76
NDUFS4O43181 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NDUFS4O43181 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.8■□□□□ 0.76
NDUFS4O43181 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDUFS4O43181 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.79■□□□□ 0.76
NDUFS4O43181 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFS4O43181 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFS4O43181 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFS4O43181 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.79■□□□□ 0.76
NDUFS4O43181 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.79■□□□□ 0.76
NDUFS4O43181 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFS4O43181 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.79■□□□□ 0.76
NDUFS4O43181 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.79■□□□□ 0.76
NDUFS4O43181 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.79■□□□□ 0.76
NDUFS4O43181 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.79■□□□□ 0.76
NDUFS4O43181 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
NDUFS4O43181 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFS4O43181 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.79■□□□□ 0.76
NDUFS4O43181 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.79■□□□□ 0.76
NDUFS4O43181 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NDUFS4O43181 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFS4O43181 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFS4O43181 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFS4O43181 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFS4O43181 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NDUFS4O43181 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFS4O43181 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.78■□□□□ 0.76
NDUFS4O43181 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFS4O43181 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.78■□□□□ 0.76
NDUFS4O43181 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.78■□□□□ 0.76
NDUFS4O43181 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.78■□□□□ 0.76
NDUFS4O43181 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.78■□□□□ 0.76
NDUFS4O43181 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NDUFS4O43181 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFS4O43181 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
NDUFS4O43181 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NDUFS4O43181 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.78■□□□□ 0.76
NDUFS4O43181 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NDUFS4O43181 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.78■□□□□ 0.76
NDUFS4O43181 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.78■□□□□ 0.76
NDUFS4O43181 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDUFS4O43181 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDUFS4O43181 AC121338.2-201ENST00000622535 1744 ntBASIC19.77■□□□□ 0.76
NDUFS4O43181 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NDUFS4O43181 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NDUFS4O43181 AC091799.1-201ENST00000422823 811 ntBASIC19.77■□□□□ 0.76
NDUFS4O43181 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.77■□□□□ 0.76
NDUFS4O43181 AC073111.5-205ENST00000641717 521 ntBASIC19.77■□□□□ 0.76
NDUFS4O43181 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.77■□□□□ 0.76
NDUFS4O43181 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.77■□□□□ 0.76
NDUFS4O43181 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NDUFS4O43181 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NDUFS4O43181 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NDUFS4O43181 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NDUFS4O43181 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFS4O43181 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NDUFS4O43181 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFS4O43181 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFS4O43181 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
NDUFS4O43181 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFS4O43181 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.76■□□□□ 0.75
NDUFS4O43181 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
NDUFS4O43181 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.76■□□□□ 0.75
NDUFS4O43181 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.76■□□□□ 0.75
NDUFS4O43181 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.76■□□□□ 0.75
NDUFS4O43181 CNN2P6-201ENST00000439038 900 ntBASIC19.76■□□□□ 0.75
NDUFS4O43181 AC231657.2-201ENST00000624556 255 ntBASIC19.76■□□□□ 0.75
NDUFS4O43181 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NDUFS4O43181 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NDUFS4O43181 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFS4O43181 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFS4O43181 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFS4O43181 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFS4O43181 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NDUFS4O43181 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms