Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TAF4O00268 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
TAF4O00268 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TAF4O00268 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TAF4O00268 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TAF4O00268 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TAF4O00268 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TAF4O00268 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TAF4O00268 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.18■□□□□ 0.82
TAF4O00268 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TAF4O00268 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.18■□□□□ 0.82
TAF4O00268 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.18■□□□□ 0.82
TAF4O00268 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.18■□□□□ 0.82
TAF4O00268 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.18■□□□□ 0.82
TAF4O00268 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.18■□□□□ 0.82
TAF4O00268 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.18■□□□□ 0.82
TAF4O00268 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.18■□□□□ 0.82
TAF4O00268 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.18■□□□□ 0.82
TAF4O00268 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TAF4O00268 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.17■□□□□ 0.82
TAF4O00268 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TAF4O00268 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TAF4O00268 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TAF4O00268 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TAF4O00268 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TAF4O00268 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TAF4O00268 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TAF4O00268 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TAF4O00268 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.17■□□□□ 0.82
TAF4O00268 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TAF4O00268 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.17■□□□□ 0.82
TAF4O00268 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TAF4O00268 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.17■□□□□ 0.82
TAF4O00268 FAM197Y4-202ENST00000622692 608 ntBASIC20.17■□□□□ 0.82
TAF4O00268 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.17■□□□□ 0.82
TAF4O00268 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TAF4O00268 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TAF4O00268 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.17■□□□□ 0.82
TAF4O00268 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TAF4O00268 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
TAF4O00268 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TAF4O00268 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
TAF4O00268 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TAF4O00268 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TAF4O00268 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TAF4O00268 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TAF4O00268 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TAF4O00268 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TAF4O00268 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TAF4O00268 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.16■□□□□ 0.82
TAF4O00268 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.16■□□□□ 0.82
TAF4O00268 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TAF4O00268 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.16■□□□□ 0.82
TAF4O00268 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.16■□□□□ 0.82
TAF4O00268 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TAF4O00268 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TAF4O00268 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TAF4O00268 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TAF4O00268 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.15■□□□□ 0.82
TAF4O00268 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TAF4O00268 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TAF4O00268 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TAF4O00268 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.15■□□□□ 0.82
TAF4O00268 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TAF4O00268 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.15■□□□□ 0.82
TAF4O00268 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.15■□□□□ 0.82
TAF4O00268 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.15■□□□□ 0.82
TAF4O00268 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.15■□□□□ 0.82
TAF4O00268 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.15■□□□□ 0.82
TAF4O00268 BX088651.1-201ENST00000540551 451 ntBASIC20.15■□□□□ 0.82
TAF4O00268 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.15■□□□□ 0.82
TAF4O00268 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TAF4O00268 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.15■□□□□ 0.82
TAF4O00268 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TAF4O00268 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TAF4O00268 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TAF4O00268 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
TAF4O00268 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TAF4O00268 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TAF4O00268 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TAF4O00268 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TAF4O00268 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TAF4O00268 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
TAF4O00268 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TAF4O00268 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TAF4O00268 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.14■□□□□ 0.81
TAF4O00268 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.14■□□□□ 0.81
TAF4O00268 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.14■□□□□ 0.81
TAF4O00268 AC010980.2-201ENST00000587099 1412 ntBASIC20.14■□□□□ 0.81
TAF4O00268 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TAF4O00268 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.14■□□□□ 0.81
TAF4O00268 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TAF4O00268 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TAF4O00268 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TAF4O00268 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TAF4O00268 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.14■□□□□ 0.81
TAF4O00268 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TAF4O00268 C1QBPP2-201ENST00000528754 825 ntBASIC20.14■□□□□ 0.81
TAF4O00268 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.14■□□□□ 0.81
TAF4O00268 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms