Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.44■□□□□ 0.38
SIRPB1O00241 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIRPB1O00241 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SIRPB1O00241 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SIRPB1O00241 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIRPB1O00241 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIRPB1O00241 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIRPB1O00241 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SIRPB1O00241 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIRPB1O00241 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIRPB1O00241 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.44■□□□□ 0.38
SIRPB1O00241 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.44■□□□□ 0.38
SIRPB1O00241 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.44■□□□□ 0.38
SIRPB1O00241 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.44■□□□□ 0.38
SIRPB1O00241 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.44■□□□□ 0.38
SIRPB1O00241 KRT18P14-201ENST00000534205 1250 ntBASIC17.44■□□□□ 0.38
SIRPB1O00241 TERF1P2-201ENST00000583350 1212 ntBASIC17.44■□□□□ 0.38
SIRPB1O00241 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.44■□□□□ 0.38
SIRPB1O00241 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIRPB1O00241 AC120498.10-201ENST00000621827 505 ntBASIC17.44■□□□□ 0.38
SIRPB1O00241 AIRN-201ENST00000601203 4374 ntBASIC17.44■□□□□ 0.38
SIRPB1O00241 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.44■□□□□ 0.38
SIRPB1O00241 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SIRPB1O00241 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SIRPB1O00241 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIRPB1O00241 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SIRPB1O00241 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.43■□□□□ 0.38
SIRPB1O00241 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.43■□□□□ 0.38
SIRPB1O00241 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SIRPB1O00241 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SIRPB1O00241 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.43■□□□□ 0.38
SIRPB1O00241 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SIRPB1O00241 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.43■□□□□ 0.38
SIRPB1O00241 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SIRPB1O00241 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 AC010141.2-201ENST00000452426 721 ntBASIC17.43■□□□□ 0.38
SIRPB1O00241 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.43■□□□□ 0.38
SIRPB1O00241 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.43■□□□□ 0.38
SIRPB1O00241 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.43■□□□□ 0.38
SIRPB1O00241 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.43■□□□□ 0.38
SIRPB1O00241 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SIRPB1O00241 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SIRPB1O00241 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.43■□□□□ 0.38
SIRPB1O00241 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.43■□□□□ 0.38
SIRPB1O00241 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIRPB1O00241 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.43■□□□□ 0.38
SIRPB1O00241 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SIRPB1O00241 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.42■□□□□ 0.38
SIRPB1O00241 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SIRPB1O00241 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SIRPB1O00241 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.42■□□□□ 0.38
SIRPB1O00241 DUX4L2-201ENST00000561772 1275 ntBASIC17.42■□□□□ 0.38
SIRPB1O00241 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.42■□□□□ 0.38
SIRPB1O00241 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.42■□□□□ 0.38
SIRPB1O00241 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
SIRPB1O00241 DUX4L6-201ENST00000626483 1275 ntBASIC17.42■□□□□ 0.38
SIRPB1O00241 DUX4L1-201ENST00000627662 1275 ntBASIC17.42■□□□□ 0.38
SIRPB1O00241 DUX4L8-201ENST00000629013 1275 ntBASIC17.42■□□□□ 0.38
SIRPB1O00241 DUX4L3-201ENST00000630187 1275 ntBASIC17.42■□□□□ 0.38
SIRPB1O00241 DUX4L7-201ENST00000630678 1275 ntBASIC17.42■□□□□ 0.38
SIRPB1O00241 DUX4L5-201ENST00000630834 1275 ntBASIC17.42■□□□□ 0.38
SIRPB1O00241 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.42■□□□□ 0.38
SIRPB1O00241 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SIRPB1O00241 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.42■□□□□ 0.38
SIRPB1O00241 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
SIRPB1O00241 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIRPB1O00241 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.42■□□□□ 0.38
SIRPB1O00241 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIRPB1O00241 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIRPB1O00241 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.41■□□□□ 0.38
SIRPB1O00241 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms