Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NPIPA2E9PIF3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.84■□□□□ 0.61
NPIPA2E9PIF3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NPIPA2E9PIF3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.84■□□□□ 0.61
NPIPA2E9PIF3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NPIPA2E9PIF3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA2E9PIF3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA2E9PIF3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA2E9PIF3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NPIPA2E9PIF3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPA2E9PIF3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPA2E9PIF3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPA2E9PIF3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
NPIPA2E9PIF3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPA2E9PIF3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPA2E9PIF3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPA2E9PIF3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPA2E9PIF3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 TMEM191A-211ENST00000637163 1067 ntBASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPA2E9PIF3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 BX276092.2-201ENST00000417668 665 ntBASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 AC243732.1-201ENST00000612648 864 ntBASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA2E9PIF3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.81■□□□□ 0.6
NPIPA2E9PIF3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 MIR4651-201ENST00000582622 73 ntBASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NPIPA2E9PIF3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA2E9PIF3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA2E9PIF3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA2E9PIF3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA2E9PIF3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPA2E9PIF3 Z98882.1-201ENST00000622160 2253 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms