Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.39■■□□□ 1.49
TMEM88BA6NKF7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC24.39■■□□□ 1.49
TMEM88BA6NKF7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.39■■□□□ 1.49
TMEM88BA6NKF7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC24.39■■□□□ 1.49
TMEM88BA6NKF7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TMEM88BA6NKF7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TMEM88BA6NKF7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TMEM88BA6NKF7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.39■■□□□ 1.49
TMEM88BA6NKF7 AC079598.2-202ENST00000546624 1451 ntBASIC24.38■■□□□ 1.49
TMEM88BA6NKF7 KRT18P22-201ENST00000402024 1347 ntBASIC24.38■■□□□ 1.49
TMEM88BA6NKF7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM88BA6NKF7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.38■■□□□ 1.49
TMEM88BA6NKF7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM88BA6NKF7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM88BA6NKF7 FAM197Y1-201ENST00000421178 764 ntBASIC24.38■■□□□ 1.49
TMEM88BA6NKF7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.38■■□□□ 1.49
TMEM88BA6NKF7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC24.38■■□□□ 1.49
TMEM88BA6NKF7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM88BA6NKF7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM88BA6NKF7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 HTR7P1-201ENST00000538670 1336 ntBASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 UNC93B2-201ENST00000285383 730 ntBASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TMEM88BA6NKF7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC24.36■■□□□ 1.49
TMEM88BA6NKF7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
TMEM88BA6NKF7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TMEM88BA6NKF7 UPK3BP1-201ENST00000428678 509 ntBASIC24.36■■□□□ 1.49
TMEM88BA6NKF7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.36■■□□□ 1.49
TMEM88BA6NKF7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.36■■□□□ 1.49
TMEM88BA6NKF7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TMEM88BA6NKF7 AP000525.1-201ENST00000608286 694 ntBASIC24.36■■□□□ 1.49
TMEM88BA6NKF7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TMEM88BA6NKF7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 AL353807.1-201ENST00000427475 662 ntBASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
TMEM88BA6NKF7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 MIR1238-201ENST00000408483 83 ntBASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 KRT126P-201ENST00000549467 1181 ntBASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 NAPSB-206ENST00000562112 1266 ntBASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TMEM88BA6NKF7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 SLC25A3P1-201ENST00000443844 931 ntBASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 WWOX-216ENST00000569818 525 ntBASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 AL031963.3-201ENST00000606441 850 ntBASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TMEM88BA6NKF7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms