Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AC008406.3-201ENST00000620001 1374 ntBASIC20.84■□□□□ 0.93
TCRBV9S1A1TA0A576 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TCRBV9S1A1TA0A576 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV9S1A1TA0A576 AC112907.3-201ENST00000577781 2400 ntBASIC20.83■□□□□ 0.93
TCRBV9S1A1TA0A576 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV9S1A1TA0A576 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV9S1A1TA0A576 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.83■□□□□ 0.93
TCRBV9S1A1TA0A576 AC012414.1-201ENST00000556676 535 ntBASIC20.83■□□□□ 0.93
TCRBV9S1A1TA0A576 AF213884.3-201ENST00000563833 479 ntBASIC20.83■□□□□ 0.93
TCRBV9S1A1TA0A576 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
TCRBV9S1A1TA0A576 AL355001.2-201ENST00000620617 1191 ntBASIC20.83■□□□□ 0.93
TCRBV9S1A1TA0A576 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.83■□□□□ 0.92
TCRBV9S1A1TA0A576 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.83■□□□□ 0.92
TCRBV9S1A1TA0A576 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV9S1A1TA0A576 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV9S1A1TA0A576 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TCRBV9S1A1TA0A576 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.83■□□□□ 0.92
TCRBV9S1A1TA0A576 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TCRBV9S1A1TA0A576 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TCRBV9S1A1TA0A576 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 AC091305.1-201ENST00000479476 895 ntBASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 TPRG1LP1-201ENST00000598702 760 ntBASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TCRBV9S1A1TA0A576 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 AC110285.6-201ENST00000617652 491 ntBASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TCRBV9S1A1TA0A576 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV9S1A1TA0A576 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV9S1A1TA0A576 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.79■□□□□ 0.92
TCRBV9S1A1TA0A576 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.79■□□□□ 0.92
TCRBV9S1A1TA0A576 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.79■□□□□ 0.92
TCRBV9S1A1TA0A576 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.79■□□□□ 0.92
TCRBV9S1A1TA0A576 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.79■□□□□ 0.92
TCRBV9S1A1TA0A576 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.79■□□□□ 0.92
TCRBV9S1A1TA0A576 AL031432.3-201ENST00000607698 485 ntBASIC20.79■□□□□ 0.92
TCRBV9S1A1TA0A576 AL136967.2-201ENST00000623968 743 ntBASIC20.79■□□□□ 0.92
TCRBV9S1A1TA0A576 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.79■□□□□ 0.92
TCRBV9S1A1TA0A576 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV9S1A1TA0A576 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TCRBV9S1A1TA0A576 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TCRBV9S1A1TA0A576 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms