Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 AC060814.1-201ENST00000554326 538 ntBASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 AC009086.3-201ENST00000623486 1008 ntBASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 DYM-203ENST00000442713 2147 ntTSL 2 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
TRAV22A0A0B4J277 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 AC026202.3-201ENST00000600805 1127 ntBASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 AC011551.1-201ENST00000614101 683 ntBASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 HGH1-207ENST00000628266 258 ntTSL 5 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 C17orf82-201ENST00000623772 1530 ntBASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 AC006128.1-201ENST00000624704 1661 ntBASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
TRAV22A0A0B4J277 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 AGPS-202ENST00000409888 815 ntTSL 4 BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 NEFHP1-201ENST00000412845 2629 ntBASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 AL162393.1-201ENST00000437852 946 ntBASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 LINC01529-204ENST00000636474 1715 ntBASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 OR6D1P-202ENST00000641007 5290 ntBASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TRAV22A0A0B4J277 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
TRAV22A0A0B4J277 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms