Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AP001652.1-201ENST00000531918 643 ntTSL 3 BASIC10.08□□□□□ -0.8
SLC1A1P43005 LIPM-202ENST00000539337 1197 ntTSL 2 BASIC10.08□□□□□ -0.8
SLC1A1P43005 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SLC1A1P43005 Metazoa_SRP.121-201ENST00000578843 303 ntBASIC10.08□□□□□ -0.8
SLC1A1P43005 MIR3194-201ENST00000582236 73 ntBASIC10.08□□□□□ -0.8
SLC1A1P43005 AC008555.5-201ENST00000603718 515 ntTSL 2 BASIC10.08□□□□□ -0.8
SLC1A1P43005 UNGP3-201ENST00000603734 675 ntBASIC10.08□□□□□ -0.8
SLC1A1P43005 CHCHD2P11-201ENST00000604283 457 ntBASIC10.08□□□□□ -0.8
SLC1A1P43005 GTF2IP1-205ENST00000618412 2990 ntTSL 2 BASIC10.08□□□□□ -0.8
SLC1A1P43005 RN7SL627P-201ENST00000620534 303 ntBASIC10.08□□□□□ -0.8
SLC1A1P43005 KCNE1-206ENST00000432085 3184 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SLC1A1P43005 B3GALT5-AS1-201ENST00000329618 1357 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SLC1A1P43005 EPS15L1-212ENST00000597937 3486 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SLC1A1P43005 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
SLC1A1P43005 C1orf198-202ENST00000427697 3666 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
SLC1A1P43005 CEP63-201ENST00000332047 2056 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SLC1A1P43005 AL590426.1-201ENST00000440811 2285 ntBASIC10.08□□□□□ -0.8
SLC1A1P43005 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SLC1A1P43005 FBXO3-201ENST00000265651 2397 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
SLC1A1P43005 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
SLC1A1P43005 POLR3B-202ENST00000539066 4118 ntTSL 2 BASIC10.08□□□□□ -0.8
SLC1A1P43005 ZNF608-203ENST00000504926 4726 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SLC1A1P43005 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
SLC1A1P43005 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 FHL1-229ENST00000629039 1501 ntTSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 AL132655.3-201ENST00000603095 1619 ntTSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 SERPINA10-201ENST00000261994 4978 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 BCL2L13-211ENST00000493680 2112 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 PIK3R1-202ENST00000336483 2439 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 C11orf45-201ENST00000310799 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 MOV10L1-209ENST00000540615 3941 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 TSPAN18-201ENST00000340160 4229 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SLC1A1P43005 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 IL36G-201ENST00000259205 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 TAC4-202ENST00000334568 675 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC10.07□□□□□ -0.8
SLC1A1P43005 CSF2RA-203ENST00000381500 1283 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 TRBV20-1-201ENST00000390394 413 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SLC1A1P43005 RN7SKP172-201ENST00000411341 298 ntBASIC10.07□□□□□ -0.8
SLC1A1P43005 Z84484.1-201ENST00000411643 319 ntTSL 3 BASIC10.07□□□□□ -0.8
SLC1A1P43005 AL591074.1-201ENST00000437012 797 ntTSL 5 BASIC10.07□□□□□ -0.8
SLC1A1P43005 ZNF816-205ENST00000438970 491 ntTSL 4 BASIC10.07□□□□□ -0.8
SLC1A1P43005 AL356276.1-201ENST00000453692 758 ntTSL 3 BASIC10.07□□□□□ -0.8
SLC1A1P43005 AC108448.1-201ENST00000455154 293 ntTSL 3 BASIC10.07□□□□□ -0.8
SLC1A1P43005 RN7SL430P-201ENST00000464176 242 ntBASIC10.07□□□□□ -0.8
SLC1A1P43005 RN7SL108P-201ENST00000481903 297 ntBASIC10.07□□□□□ -0.8
SLC1A1P43005 AC006978.1-201ENST00000496846 1234 ntBASIC10.07□□□□□ -0.8
SLC1A1P43005 GPHA2-203ENST00000533257 582 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 COA4-202ENST00000537289 582 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 AC007552.2-201ENST00000541892 603 ntTSL 4 BASIC10.07□□□□□ -0.8
SLC1A1P43005 C1RL-211ENST00000545280 449 ntTSL 3 BASIC10.07□□□□□ -0.8
SLC1A1P43005 ISCA2-202ENST00000554924 489 ntTSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 AC027088.2-201ENST00000559870 916 ntTSL 3 BASIC10.07□□□□□ -0.8
SLC1A1P43005 AC046168.2-202ENST00000561123 926 ntTSL 3 BASIC10.07□□□□□ -0.8
SLC1A1P43005 IGHV1OR16-4-201ENST00000566350 205 ntBASIC10.07□□□□□ -0.8
SLC1A1P43005 CIAPIN1-214ENST00000569979 896 ntTSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 RN7SL693P-201ENST00000579576 279 ntBASIC10.07□□□□□ -0.8
SLC1A1P43005 RN7SL391P-201ENST00000582559 284 ntBASIC10.07□□□□□ -0.8
SLC1A1P43005 EIF3K-208ENST00000588934 501 ntTSL 3 BASIC10.07□□□□□ -0.8
SLC1A1P43005 ST6GALNAC1-207ENST00000589992 419 ntTSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 EAF1-AS1-205ENST00000595975 892 ntTSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 AL596094.1-201ENST00000608273 276 ntTSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 TRAC-201ENST00000611116 976 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SLC1A1P43005 EDRF1-AS1-211ENST00000615461 592 ntTSL 5 BASIC10.07□□□□□ -0.8
SLC1A1P43005 AC100757.2-201ENST00000622316 280 ntBASIC10.07□□□□□ -0.8
SLC1A1P43005 AC005796.1-201ENST00000623214 433 ntBASIC10.07□□□□□ -0.8
SLC1A1P43005 AL732372.1-203ENST00000635159 994 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 AL117339.1-203ENST00000638066 888 ntBASIC10.07□□□□□ -0.8
SLC1A1P43005 AP000552.1-202ENST00000436681 3714 ntTSL 5 BASIC10.07□□□□□ -0.8
SLC1A1P43005 VWA3B-213ENST00000477737 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 ZNF561-202ENST00000326044 2017 ntTSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 NRXN3-215ENST00000557594 3381 ntTSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 TBC1D3P1-DHX40P1-201ENST00000587125 1841 ntTSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 ABCC2-201ENST00000370434 1714 ntTSL 2 BASIC10.07□□□□□ -0.8
SLC1A1P43005 PDE4DIPP1-201ENST00000420737 1641 ntBASIC10.07□□□□□ -0.8
SLC1A1P43005 PNPLA1-201ENST00000312917 1518 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 TNC-210ENST00000535648 7508 ntTSL 5 BASIC10.07□□□□□ -0.8
SLC1A1P43005 ZNF239-201ENST00000306006 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 GJB2-202ENST00000382848 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SLC1A1P43005 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 NCOA4P4-201ENST00000513338 1861 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 IFT122-206ENST00000440957 4007 ntTSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 Z95114.2-201ENST00000623490 2205 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 CBR3-AS1-204ENST00000453159 1499 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 NEDD1-203ENST00000429527 3366 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 AF241726.1-201ENST00000317902 699 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 MRPL55-204ENST00000348259 661 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 LINC01560-201ENST00000357412 1253 ntBASIC10.06□□□□□ -0.8
SLC1A1P43005 ZNF343-202ENST00000358413 771 ntTSL 5 BASIC10.06□□□□□ -0.8
SLC1A1P43005 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 C10orf53-201ENST00000374111 799 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SLC1A1P43005 APOM-201ENST00000375916 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 APOM-203ENST00000375920 709 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SLC1A1P43005 AL121949.1-201ENST00000402043 968 ntBASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms