Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NCAPD2P1-201ENST00000432906 1801 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 U91328.2-201ENST00000606723 4130 ntTSL 2 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 TTLL5-221ENST00000557636 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 MYT1L-203ENST00000407844 3642 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 AC008013.1-204ENST00000222396 623 ntTSL 4 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 ZNF561-201ENST00000302851 4693 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 AL450998.1-201ENST00000321418 438 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 TBC1D3P4-201ENST00000338790 1075 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 DNASE2B-201ENST00000370662 1130 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 NCR2-202ENST00000373086 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 NCR2-203ENST00000373089 942 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 IGLV2-18-201ENST00000390310 367 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 SNRPD2-202ENST00000391932 615 ntTSL 2 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 PGM5P4-AS1-201ENST00000416105 645 ntTSL 3 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 RPSAP9-201ENST00000418207 888 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 AC114489.1-201ENST00000421619 395 ntTSL 3 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 AL391058.1-201ENST00000424736 1029 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 CDCA4P1-201ENST00000442667 624 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 AL441964.1-201ENST00000454528 658 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 RPL5P1-201ENST00000460716 894 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 RPSAP47-201ENST00000479228 888 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 RPSAP29-201ENST00000483479 869 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 SUCLG2P4-201ENST00000514739 1027 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 DERL1-205ENST00000523036 542 ntTSL 4 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 AC018620.1-201ENST00000523233 379 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 LINC01863-201ENST00000523242 494 ntTSL 2 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 MRVI1-AS1-201ENST00000525578 829 ntTSL 3 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 RPS3-219ENST00000534440 564 ntTSL 2 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 AC131157.1-201ENST00000547902 722 ntTSL 5 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 AC005476.2-202ENST00000554634 464 ntTSL 5 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 CSHL1-210ENST00000561003 880 ntTSL 2 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 AC010931.1-201ENST00000565063 386 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 ADAM3B-201ENST00000569937 840 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 AC100791.1-201ENST00000570408 324 ntTSL 2 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 AC020904.1-201ENST00000594322 729 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 LINC01796-201ENST00000611915 709 ntTSL 3 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 AC010335.2-201ENST00000623166 528 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 PTGR2-203ENST00000553813 1351 ntTSL 5 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 AL033381.1-201ENST00000314040 3435 ntTSL 2 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 SNX13-203ENST00000428135 6357 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 NMT2-201ENST00000378150 2457 ntTSL 2 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 GLDN-202ENST00000396399 4584 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 ZNF30-206ENST00000601957 2583 ntTSL 2 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 AL139020.1-203ENST00000556386 2738 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 RASGRP1-213ENST00000561180 2707 ntTSL 2 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 AL022323.3-201ENST00000623888 5388 ntBASIC8.94□□□□□ -0.98
SNX18Q96RF0 DEPDC5-204ENST00000400246 5551 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SNX18Q96RF0 NXPE2-201ENST00000389586 1873 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
SNX18Q96RF0 EPB41L2-201ENST00000337057 4457 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 AL157815.1-201ENST00000635484 2117 ntBASIC8.93□□□□□ -0.98
SNX18Q96RF0 CTAGE9-201ENST00000314099 2334 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 SOX5-212ENST00000541536 2365 ntTSL 2 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 ZNF816-206ENST00000444460 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 ZNF585A-203ENST00000392157 3190 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 IL6-201ENST00000258743 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 ZNF669-203ENST00000366501 730 ntTSL 3 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 CTNNBL1-202ENST00000373469 1130 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 TMEM211-201ENST00000407886 866 ntTSL 3 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 RN7SKP150-201ENST00000410516 321 ntBASIC8.93□□□□□ -0.98
SNX18Q96RF0 FLJ42102-202ENST00000460880 1116 ntBASIC8.93□□□□□ -0.98
SNX18Q96RF0 RPL7AP11-201ENST00000486538 799 ntBASIC8.93□□□□□ -0.98
SNX18Q96RF0 RN7SL127P-201ENST00000494856 300 ntBASIC8.93□□□□□ -0.98
SNX18Q96RF0 ARHGAP22-IT1-201ENST00000505718 470 ntTSL 3 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 TSC22D3-216ENST00000514426 569 ntTSL 5 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 AC067930.1-201ENST00000517300 291 ntBASIC8.93□□□□□ -0.98
SNX18Q96RF0 IGHVII-26-2-201ENST00000518751 325 ntBASIC8.93□□□□□ -0.98
SNX18Q96RF0 MAX-213ENST00000556443 585 ntTSL 2 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 AC100836.1-201ENST00000557426 877 ntTSL 3 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 PPP2R5C-230ENST00000557714 536 ntTSL 4 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 AC018362.1-201ENST00000564805 846 ntTSL 5 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 AC010531.3-201ENST00000569147 513 ntTSL 4 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 ARPP19-212ENST00000569281 661 ntAPPRIS P1 TSL 4 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 AC090079.1-201ENST00000572092 1183 ntBASIC8.93□□□□□ -0.98
SNX18Q96RF0 VPS4B-207ENST00000591519 551 ntTSL 2 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 AL133227.1-201ENST00000612368 594 ntTSL 4 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 AC005578.1-201ENST00000622962 1020 ntBASIC8.93□□□□□ -0.98
SNX18Q96RF0 THRB-AS1-209ENST00000628911 850 ntTSL 5 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 AC009831.2-201ENST00000581802 1441 ntBASIC8.93□□□□□ -0.98
SNX18Q96RF0 HTR3C-201ENST00000318351 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 IL24-201ENST00000294984 1701 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 NDP-201ENST00000378062 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 CBX5-202ENST00000439541 1832 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 AC116553.3-201ENST00000624242 1800 ntBASIC8.93□□□□□ -0.98
SNX18Q96RF0 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
SNX18Q96RF0 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SNX18Q96RF0 AC092017.4-202ENST00000638931 2006 ntTSL 5 BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms