Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AP002439.1-201ENST00000588204 480 ntTSL 4 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 AC243960.1-202ENST00000601116 601 ntTSL 2 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 RN7SKP4-201ENST00000606815 322 ntBASIC10.32□□□□□ -0.76
LMO3Q8TAP4 REST-205ENST00000611211 1103 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 Metazoa_SRP.206-201ENST00000612004 332 ntBASIC10.32□□□□□ -0.76
LMO3Q8TAP4 AL157931.2-201ENST00000635091 463 ntBASIC10.32□□□□□ -0.76
LMO3Q8TAP4 AC106774.10-201ENST00000638486 599 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 OLMALINC-205ENST00000641708 1184 ntBASIC10.32□□□□□ -0.76
LMO3Q8TAP4 AP003080.1-201ENST00000527374 2371 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 CHRNA9-201ENST00000310169 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 TBC1D13-201ENST00000223865 3378 ntTSL 2 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 ITGB1BP2-205ENST00000538820 1439 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 SLAMF7-206ENST00000458104 2345 ntTSL 2 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 GRSF1-203ENST00000502323 1794 ntTSL 5 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 USP35-201ENST00000526425 3770 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 KIAA1644-201ENST00000381176 6751 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 RAB6B-207ENST00000543906 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 CTNNA2-203ENST00000402739 3684 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 POTEKP-201ENST00000397487 2688 ntBASIC10.31□□□□□ -0.76
LMO3Q8TAP4 ANO7-201ENST00000274979 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 SAXO2-201ENST00000339465 3134 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 TFDP3-201ENST00000310125 1680 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 PGM2L1-201ENST00000298198 8515 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 AL035696.1-201ENST00000381078 2007 ntTSL 2 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 AFAP1L2-201ENST00000304129 3705 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 PNPT1-205ENST00000447944 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 WDR47-205ENST00000400794 4134 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 AC025031.5-201ENST00000623851 2523 ntBASIC10.31□□□□□ -0.76
LMO3Q8TAP4 S100P-201ENST00000296370 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 SLN-201ENST00000305991 722 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 ST3GAL3-216ENST00000372368 1290 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 SPP2-202ENST00000373368 860 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 LINC01946-201ENST00000416279 418 ntTSL 5 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 AC092035.1-201ENST00000418538 390 ntBASIC10.31□□□□□ -0.76
LMO3Q8TAP4 AC118555.1-201ENST00000426386 696 ntTSL 3 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 AL035411.1-201ENST00000427762 690 ntBASIC10.31□□□□□ -0.76
LMO3Q8TAP4 FERP1-201ENST00000436391 793 ntBASIC10.31□□□□□ -0.76
LMO3Q8TAP4 LINC01186-201ENST00000446884 626 ntTSL 2 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 LINC02142-201ENST00000500616 577 ntTSL 3 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 ENY2-208ENST00000520147 857 ntTSL 4 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 ATP5J2P5-201ENST00000537967 258 ntBASIC10.31□□□□□ -0.76
LMO3Q8TAP4 AC117498.1-201ENST00000548742 713 ntTSL 2 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 LINC00555-201ENST00000569288 442 ntBASIC10.31□□□□□ -0.76
LMO3Q8TAP4 RPL36-205ENST00000579649 449 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 AC015688.1-201ENST00000584894 199 ntBASIC10.31□□□□□ -0.76
LMO3Q8TAP4 Metazoa_SRP.142-201ENST00000612810 316 ntBASIC10.31□□□□□ -0.76
LMO3Q8TAP4 AC099518.6-201ENST00000617407 450 ntBASIC10.31□□□□□ -0.76
LMO3Q8TAP4 AC015978.1-201ENST00000635343 890 ntBASIC10.31□□□□□ -0.76
LMO3Q8TAP4 AC183088.2-201ENST00000637451 883 ntBASIC10.31□□□□□ -0.76
LMO3Q8TAP4 DNTT-202ENST00000630152 1954 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 MEF2C-203ENST00000437473 4340 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 MTHFD2P1-203ENST00000494840 2595 ntTSL 2 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 RMND1-201ENST00000336451 1413 ntTSL 2 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 TRY2P-202ENST00000616556 2039 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 OGDHL-201ENST00000374103 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 TMPRSS4-AS1-204ENST00000636151 3397 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 SLC14A1-203ENST00000415427 1554 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
LMO3Q8TAP4 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 ARHGEF9-232ENST00000637417 5114 ntTSL 5 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 RBM22-201ENST00000199814 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 MCTP2-203ENST00000451018 2472 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 MRPS11-201ENST00000325844 3644 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 OIT3-201ENST00000334011 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 NAMA-204ENST00000604258 2133 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 ZNF568-202ENST00000415168 3774 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 NCEH1-204ENST00000475381 4687 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 GJB2-202ENST00000382848 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 SF3B2-201ENST00000322535 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 MRPL55-204ENST00000348259 661 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 LINC00159-201ENST00000411605 438 ntTSL 3 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 COL4A2-AS1-201ENST00000417970 540 ntTSL 3 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 AL355001.1-201ENST00000422148 444 ntTSL 5 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 AL021707.4-201ENST00000423346 410 ntTSL 5 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 AC017053.1-201ENST00000425125 579 ntTSL 4 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 POLR2H-206ENST00000452961 791 ntTSL 2 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 AC009945.1-201ENST00000453188 298 ntBASIC10.3□□□□□ -0.76
LMO3Q8TAP4 RN7SL359P-201ENST00000473502 288 ntBASIC10.3□□□□□ -0.76
LMO3Q8TAP4 ZFAT-AS1-201ENST00000505776 939 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 AC034154.1-202ENST00000518105 691 ntTSL 3 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 LYNX1-207ENST00000523332 600 ntTSL 3 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 RAD52-217ENST00000544742 463 ntTSL 4 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 RRN3P1-203ENST00000551681 1151 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 AC092718.2-201ENST00000562315 487 ntTSL 3 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 AC010760.1-201ENST00000565129 545 ntTSL 2 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 AC005828.2-201ENST00000580253 562 ntTSL 4 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 HINT1P2-201ENST00000604731 235 ntBASIC10.3□□□□□ -0.76
LMO3Q8TAP4 OR4E1-201ENST00000610316 900 ntAPPRIS ALT1 BASIC10.3□□□□□ -0.76
LMO3Q8TAP4 IGKV2D-29-202ENST00000612356 310 ntBASIC10.3□□□□□ -0.76
LMO3Q8TAP4 BSNDP2-201ENST00000621945 366 ntBASIC10.3□□□□□ -0.76
LMO3Q8TAP4 AC005796.1-201ENST00000623214 433 ntBASIC10.3□□□□□ -0.76
LMO3Q8TAP4 AC135068.7-201ENST00000630145 568 ntTSL 2 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms