Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 FCAR-209ENST00000469767 1432 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 TRIO-224ENST00000620511 1547 ntTSL 2 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 STK32A-203ENST00000398523 1637 ntTSL 2 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 SMIM19-204ENST00000438528 2958 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 RYR1-201ENST00000355481 15377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 TIMELESS-203ENST00000553532 5121 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AC007608.3-201ENST00000570167 5214 ntTSL 2 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 XPR1-202ENST00000367590 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AC018521.7-201ENST00000580282 2927 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 CNTN4-203ENST00000418658 5093 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 C4orf46-201ENST00000379205 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 RBP7-201ENST00000294435 636 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 RN7SKP163-201ENST00000363221 330 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AL445248.1-201ENST00000366152 624 ntTSL 3 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 VTA1-201ENST00000367621 1284 ntTSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 ITGB1BP2-201ENST00000373829 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 TRAV29DV5-201ENST00000390458 469 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AP000233.2-202ENST00000418942 684 ntTSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AC008074.2-201ENST00000425381 429 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AL445426.1-201ENST00000427290 547 ntTSL 3 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 MIR646HG-206ENST00000431181 858 ntTSL 3 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 IQCF4-204ENST00000433169 414 ntTSL 3 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AC083822.1-201ENST00000438001 201 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 RPL5P26-201ENST00000438138 877 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 PRR13P1-201ENST00000456678 408 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 OR7E100P-201ENST00000489105 1015 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 RN7SL252P-201ENST00000496274 297 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 SNORA76.1-201ENST00000516313 135 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AC011716.1-201ENST00000520744 613 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 BEST3-210ENST00000551160 721 ntTSL 3 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 LINC02396-203ENST00000551922 525 ntTSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 LINC01405-204ENST00000553177 524 ntTSL 4 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 OR7E106P-201ENST00000556941 1021 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AC019294.2-201ENST00000565686 553 ntTSL 4 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 HCFC1R1-206ENST00000574151 618 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AC005323.1-201ENST00000579914 569 ntTSL 4 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 KCNH6-205ENST00000583023 3821 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AC091982.3-201ENST00000603996 1115 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 VDAC3P1-201ENST00000604654 850 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AL513327.1-208ENST00000624012 1047 ntTSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AC093495.1-214ENST00000627116 559 ntTSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 MIR6511B2-201ENST00000636908 71 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AL009172.2-201ENST00000638776 717 ntTSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 UBQLN2-201ENST00000338222 4230 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 TPD52L3-201ENST00000314556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 NREP-203ENST00000395634 1468 ntTSL 2 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 BZW2-212ENST00000452975 1464 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AL021937.1-201ENST00000420171 1558 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 TTC26-210ENST00000495038 1599 ntTSL 2 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 MYH13-203ENST00000621918 5916 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 ZNF239-201ENST00000306006 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 LINC01484-203ENST00000521128 2361 ntTSL 2 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AC021087.3-201ENST00000565521 2881 ntTSL 2 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 MXRA5Y-201ENST00000420610 8000 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 MTMR4-201ENST00000323456 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 KIAA1841-203ENST00000402291 4516 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 AC091825.1-201ENST00000622952 2621 ntBASIC10.33□□□□□ -0.76
LMO3Q8TAP4 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 SYNPO2-201ENST00000307142 7295 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 F11-202ENST00000264692 1916 ntTSL 2 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 GDF9-206ENST00000624492 1823 ntTSL 2 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 RSRC1-201ENST00000295930 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 RSRC1-215ENST00000611884 1738 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 SLC3A1-210ENST00000611973 1737 ntTSL 5 BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 PLAC8-201ENST00000311507 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LMO3Q8TAP4 EIF1AD-201ENST00000312234 2887 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 ESR1-207ENST00000440973 6466 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 PABPC1P12-201ENST00000428454 2175 ntBASIC10.32□□□□□ -0.76
LMO3Q8TAP4 AC116913.1-201ENST00000565387 2168 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 LEP-201ENST00000308868 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 KRIT1-202ENST00000394503 2827 ntTSL 2 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 NUTM1-201ENST00000333756 3795 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 ARMC4-201ENST00000305242 3572 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 YEATS2-AS1-201ENST00000425008 2442 ntTSL 4 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 CATSPER3-201ENST00000282611 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 SPECC1L-204ENST00000437398 6674 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 GPRC5D-201ENST00000228887 1038 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 SPRR4-201ENST00000328051 733 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 MED8-202ENST00000372455 1186 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 GPRC5D-202ENST00000396333 903 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 SNORA77.1-201ENST00000408156 125 ntBASIC10.32□□□□□ -0.76
LMO3Q8TAP4 RNA5SP158-201ENST00000410298 102 ntBASIC10.32□□□□□ -0.76
LMO3Q8TAP4 AL513123.1-201ENST00000415883 597 ntTSL 5 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 AL592103.1-201ENST00000446321 810 ntTSL 2 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 REG1CP-207ENST00000450249 569 ntTSL 4 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 RN7SL417P-201ENST00000459938 265 ntBASIC10.32□□□□□ -0.76
LMO3Q8TAP4 RPSAP34-201ENST00000476193 736 ntBASIC10.32□□□□□ -0.76
LMO3Q8TAP4 MRPS18C-205ENST00000507349 350 ntTSL 3 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 LINC02221-201ENST00000508097 499 ntTSL 3 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 CD59-208ENST00000527577 686 ntAPPRIS P2 TSL 3 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 AC130364.1-201ENST00000532682 795 ntBASIC10.32□□□□□ -0.76
LMO3Q8TAP4 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 AC006146.1-201ENST00000557304 693 ntTSL 5 BASIC10.32□□□□□ -0.76
LMO3Q8TAP4 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms