Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL355922.3-201ENST00000556341 578 ntBASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 AC016590.2-201ENST00000592319 375 ntTSL 3 BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 AC005176.1-202ENST00000597791 384 ntBASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 IGHV1OR15-6-201ENST00000603166 343 ntBASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 HAR1B-202ENST00000608031 773 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 AL031587.4-201ENST00000609265 691 ntBASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 AC244452.4-201ENST00000637112 283 ntBASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 UGT2A1-201ENST00000286604 1698 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 PRAMENP-202ENST00000419303 1869 ntTSL 2 BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 LIPH-202ENST00000424591 2065 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 BCO2-213ENST00000531169 2493 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 AC068282.1-201ENST00000433673 2690 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 NBPF15-203ENST00000577412 4707 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 ALOX12P2-210ENST00000574727 4326 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 AC007938.4-201ENST00000610046 4118 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 ZDHHC6-205ENST00000626395 2906 ntTSL 5 BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 AC090260.1-201ENST00000566715 1931 ntBASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 USP17L12-201ENST00000415041 1593 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 USP17L21-201ENST00000506414 1593 ntAPPRIS P2 BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 FRMD3-203ENST00000376434 1397 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 LMOD1-202ENST00000616739 3058 ntTSL 5 BASIC8.99□□□□□ -0.97
NPIPA3F8WFD2 INPP5F-202ENST00000369080 2882 ntTSL 2 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 SYT6-202ENST00000607941 4352 ntTSL 2 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 PC-203ENST00000393960 4192 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 ZNF177-201ENST00000343499 1835 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 CYTIP-201ENST00000264192 2260 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AL157712.1-201ENST00000620178 2055 ntBASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 PCDH11Y-202ENST00000333703 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 SLC4A1AP-204ENST00000613058 2966 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 FCAMR-203ENST00000400962 1898 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 EFCAB11-209ENST00000556005 1856 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 LILRB5-201ENST00000316219 3236 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 ZNF682-203ENST00000397165 3245 ntAPPRIS P2 TSL 2 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 LINC02241-201ENST00000502427 1687 ntTSL 2 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 LINC01572-206ENST00000624829 1666 ntTSL 5 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 GAREM1-201ENST00000269209 3006 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 PRPSAP2-205ENST00000419071 1491 ntTSL 2 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 PDSS2-202ENST00000369037 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 RIC3-201ENST00000309737 2859 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 C6orf58-201ENST00000329722 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 TMEM252-201ENST00000377311 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 FAM192A-202ENST00000389447 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 LIPK-201ENST00000404190 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 OR51H2P-201ENST00000413036 906 ntBASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 TRGVA-201ENST00000413819 285 ntBASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AL121748.1-201ENST00000414308 552 ntTSL 3 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 BX284668.1-202ENST00000422345 735 ntTSL 5 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AC011999.1-201ENST00000424794 1024 ntBASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 IGFL2-202ENST00000434646 885 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 NPIPB7-201ENST00000435324 1266 ntAPPRIS P5 TSL 5 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AL355483.1-201ENST00000450469 237 ntTSL 3 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 GCNT1P3-201ENST00000450607 575 ntBASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AC073135.1-201ENST00000451150 775 ntBASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AL121721.1-201ENST00000460400 568 ntTSL 4 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AC113367.1-201ENST00000498453 532 ntBASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 OR7E43P-201ENST00000503910 920 ntBASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 NR1I3-220ENST00000505005 985 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AC021148.1-203ENST00000507033 982 ntBASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 GBP1P1-202ENST00000513638 1234 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AC139365.1-201ENST00000519417 322 ntBASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AP002761.2-201ENST00000541254 618 ntTSL 3 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 RAD52-217ENST00000544742 463 ntTSL 4 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 LINC02396-203ENST00000551922 525 ntTSL 5 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 LINC01579-203ENST00000555023 400 ntTSL 3 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AC092718.2-201ENST00000562315 487 ntTSL 3 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AC245033.1-201ENST00000562833 880 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 TOMM20P3-201ENST00000579772 389 ntBASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 Z73429.1-201ENST00000610170 345 ntBASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 MIR6777-201ENST00000613934 66 ntBASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 TPM3-210ENST00000368530 1523 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 INTS3-210ENST00000512605 3442 ntTSL 2 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 DCTN4-215ENST00000627368 1774 ntTSL 5 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 RAD52-202ENST00000358495 2710 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 NEK1-203ENST00000507142 5556 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 SOX13-210ENST00000618875 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 GRM1-207ENST00000507907 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 SEZ6-204ENST00000442608 3805 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 CATSPER3-201ENST00000282611 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 ZNF141-205ENST00000512994 1611 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 PPT1-209ENST00000530076 1872 ntTSL 2 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 CEP112-203ENST00000535342 3392 ntAPPRIS P4 TSL 2 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 PFKFB1-204ENST00000614686 1353 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 WARS-201ENST00000344102 2690 ntTSL 5 BASIC8.98□□□□□ -0.97
NPIPA3F8WFD2 AC011365.1-201ENST00000522615 3478 ntTSL 2 BASIC8.97□□□□□ -0.97
NPIPA3F8WFD2 CAPN3-203ENST00000349748 2955 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
NPIPA3F8WFD2 BDKRB2-203ENST00000554311 4040 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NPIPA3F8WFD2 PIK3R1-216ENST00000523872 2473 ntTSL 2 BASIC8.97□□□□□ -0.97
NPIPA3F8WFD2 ZNF221-201ENST00000251269 2535 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NPIPA3F8WFD2 FOXP1-209ENST00000475937 4967 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
NPIPA3F8WFD2 SCNM1-202ENST00000368905 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NPIPA3F8WFD2 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NPIPA3F8WFD2 PDE11A-202ENST00000389683 1781 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
NPIPA3F8WFD2 GRHL3-204ENST00000361548 2869 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
NPIPA3F8WFD2 LINC01460-201ENST00000379677 2860 ntTSL 2 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms