Protein–RNA interactions for Protein: Q9Y678

COPG1, Coatomer subunit gamma-1, humanhuman

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1Q9Y678 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COPG1Q9Y678 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COPG1Q9Y678 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COPG1Q9Y678 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COPG1Q9Y678 AP004607.7-201ENST00000527152 1677 ntBASIC20.36■□□□□ 0.85
COPG1Q9Y678 AP005212.1-201ENST00000581547 1997 ntBASIC20.36■□□□□ 0.85
COPG1Q9Y678 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPG1Q9Y678 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.36■□□□□ 0.85
COPG1Q9Y678 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COPG1Q9Y678 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COPG1Q9Y678 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
COPG1Q9Y678 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COPG1Q9Y678 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.36■□□□□ 0.85
COPG1Q9Y678 AC092437.1-201ENST00000624794 1048 ntBASIC20.36■□□□□ 0.85
COPG1Q9Y678 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPG1Q9Y678 GABARAPL3-202ENST00000624044 1851 ntBASIC20.36■□□□□ 0.85
COPG1Q9Y678 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPG1Q9Y678 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COPG1Q9Y678 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPG1Q9Y678 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
COPG1Q9Y678 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.35■□□□□ 0.85
COPG1Q9Y678 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.35■□□□□ 0.85
COPG1Q9Y678 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.35■□□□□ 0.85
COPG1Q9Y678 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COPG1Q9Y678 AC006128.1-201ENST00000624704 1661 ntBASIC20.35■□□□□ 0.85
COPG1Q9Y678 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.35■□□□□ 0.85
COPG1Q9Y678 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPG1Q9Y678 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.34■□□□□ 0.85
COPG1Q9Y678 AC073314.1-201ENST00000568729 2216 ntBASIC20.34■□□□□ 0.85
COPG1Q9Y678 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPG1Q9Y678 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPG1Q9Y678 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPG1Q9Y678 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.34■□□□□ 0.85
COPG1Q9Y678 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
COPG1Q9Y678 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.34■□□□□ 0.85
COPG1Q9Y678 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.34■□□□□ 0.85
COPG1Q9Y678 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
COPG1Q9Y678 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPG1Q9Y678 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPG1Q9Y678 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPG1Q9Y678 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPG1Q9Y678 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPG1Q9Y678 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPG1Q9Y678 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPG1Q9Y678 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPG1Q9Y678 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPG1Q9Y678 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPG1Q9Y678 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COPG1Q9Y678 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPG1Q9Y678 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COPG1Q9Y678 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COPG1Q9Y678 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COPG1Q9Y678 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPG1Q9Y678 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.33■□□□□ 0.85
COPG1Q9Y678 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COPG1Q9Y678 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.33■□□□□ 0.85
COPG1Q9Y678 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COPG1Q9Y678 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COPG1Q9Y678 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
COPG1Q9Y678 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COPG1Q9Y678 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.33■□□□□ 0.85
COPG1Q9Y678 CCDC92B-201ENST00000575506 885 ntBASIC20.33■□□□□ 0.85
COPG1Q9Y678 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.33■□□□□ 0.84
COPG1Q9Y678 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
COPG1Q9Y678 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
COPG1Q9Y678 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.33■□□□□ 0.84
COPG1Q9Y678 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
COPG1Q9Y678 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.33■□□□□ 0.84
COPG1Q9Y678 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
COPG1Q9Y678 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
COPG1Q9Y678 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
COPG1Q9Y678 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPG1Q9Y678 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPG1Q9Y678 PLK5-205ENST00000642079 1969 ntBASIC20.32■□□□□ 0.84
COPG1Q9Y678 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPG1Q9Y678 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPG1Q9Y678 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPG1Q9Y678 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.32■□□□□ 0.84
COPG1Q9Y678 NTF6G-201ENST00000591094 616 ntBASIC20.32■□□□□ 0.84
COPG1Q9Y678 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPG1Q9Y678 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPG1Q9Y678 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.32■□□□□ 0.84
COPG1Q9Y678 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPG1Q9Y678 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPG1Q9Y678 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms