Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHGA3Q9Y5H0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 AC092053.2-201ENST00000640557 1818 ntBASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA3Q9Y5H0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 POU5F1P3-201ENST00000428824 1078 ntBASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PCDHGA3Q9Y5H0 FBXW4P1-201ENST00000426721 2239 ntBASIC20.08■□□□□ 0.8
PCDHGA3Q9Y5H0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PCDHGA3Q9Y5H0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
PCDHGA3Q9Y5H0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGA3Q9Y5H0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 AC093787.1-201ENST00000450396 207 ntBASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 AC016405.3-201ENST00000607710 860 ntBASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA3Q9Y5H0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 AC087742.1-201ENST00000575880 1738 ntBASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PCDHGA3Q9Y5H0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 AC243732.1-201ENST00000612648 864 ntBASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 ITM2C-210ENST00000620962 501 ntBASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA3Q9Y5H0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms