Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 AL591742.1-201ENST00000604433 565 ntBASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NOTCH3Q9UM47 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 AL355472.2-201ENST00000422958 438 ntBASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.93■□□□□ 0.14
NOTCH3Q9UM47 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NOTCH3Q9UM47 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
NOTCH3Q9UM47 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 AC003102.1-202ENST00000563394 1796 ntBASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NOTCH3Q9UM47 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.89■□□□□ 0.13
NOTCH3Q9UM47 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms