Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
MBD1Q9UIS9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
MBD1Q9UIS9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
MBD1Q9UIS9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
MBD1Q9UIS9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 AL596275.1-201ENST00000423464 877 ntBASIC20.98■□□□□ 0.95
MBD1Q9UIS9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
MBD1Q9UIS9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.97■□□□□ 0.95
MBD1Q9UIS9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.97■□□□□ 0.95
MBD1Q9UIS9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 AC026366.1-201ENST00000488803 879 ntBASIC20.97■□□□□ 0.95
MBD1Q9UIS9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.97■□□□□ 0.95
MBD1Q9UIS9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD1Q9UIS9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MBD1Q9UIS9 LSM12P1-201ENST00000411836 588 ntBASIC20.96■□□□□ 0.95
MBD1Q9UIS9 AL355472.2-201ENST00000422958 438 ntBASIC20.96■□□□□ 0.95
MBD1Q9UIS9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.96■□□□□ 0.95
MBD1Q9UIS9 AC073648.6-201ENST00000641589 218 ntBASIC20.96■□□□□ 0.95
MBD1Q9UIS9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.96■□□□□ 0.95
MBD1Q9UIS9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD1Q9UIS9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD1Q9UIS9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD1Q9UIS9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD1Q9UIS9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD1Q9UIS9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD1Q9UIS9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD1Q9UIS9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD1Q9UIS9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD1Q9UIS9 KRT17P1-201ENST00000399211 1546 ntBASIC20.95■□□□□ 0.94
MBD1Q9UIS9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
MBD1Q9UIS9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD1Q9UIS9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD1Q9UIS9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD1Q9UIS9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD1Q9UIS9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD1Q9UIS9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD1Q9UIS9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD1Q9UIS9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD1Q9UIS9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
MBD1Q9UIS9 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.95■□□□□ 0.94
MBD1Q9UIS9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 AP003097.1-201ENST00000530657 1135 ntBASIC20.94■□□□□ 0.94
MBD1Q9UIS9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MBD1Q9UIS9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
MBD1Q9UIS9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD1Q9UIS9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD1Q9UIS9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.93■□□□□ 0.94
MBD1Q9UIS9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms