Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.14■□□□□ 0.81
CPNE7Q9UBL6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 FBXW4P1-201ENST00000426721 2239 ntBASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 AC100791.3-201ENST00000617619 330 ntBASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CPNE7Q9UBL6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
CPNE7Q9UBL6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE7Q9UBL6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.11■□□□□ 0.81
CPNE7Q9UBL6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE7Q9UBL6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE7Q9UBL6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE7Q9UBL6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE7Q9UBL6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE7Q9UBL6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.11■□□□□ 0.81
CPNE7Q9UBL6 AC116050.2-201ENST00000612102 1779 ntBASIC20.11■□□□□ 0.81
CPNE7Q9UBL6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 LSM12P1-201ENST00000411836 588 ntBASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE7Q9UBL6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 MCRIP2P1-201ENST00000394346 511 ntBASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 AL355472.2-201ENST00000422958 438 ntBASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE7Q9UBL6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms