Protein–RNA interactions for Protein: Q9NXL2

ARHGEF38, Rho guanine nucleotide exchange factor 38, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38Q9NXL2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF38Q9NXL2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.57■■□□□ 1.04
ARHGEF38Q9NXL2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.57■■□□□ 1.04
ARHGEF38Q9NXL2 CNN2P6-201ENST00000439038 900 ntBASIC21.57■■□□□ 1.04
ARHGEF38Q9NXL2 CDCA4P2-201ENST00000441182 718 ntBASIC21.57■■□□□ 1.04
ARHGEF38Q9NXL2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ARHGEF38Q9NXL2 AC073111.5-205ENST00000641717 521 ntBASIC21.57■■□□□ 1.04
ARHGEF38Q9NXL2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.57■■□□□ 1.04
ARHGEF38Q9NXL2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.57■■□□□ 1.04
ARHGEF38Q9NXL2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF38Q9NXL2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF38Q9NXL2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ARHGEF38Q9NXL2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 AC007322.4-201ENST00000509611 723 ntBASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 RAP2CP1-201ENST00000605103 478 ntBASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 AC013268.1-206ENST00000638368 961 ntBASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 AC112229.1-201ENST00000639295 961 ntBASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.56■■□□□ 1.04
ARHGEF38Q9NXL2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 AC007375.3-201ENST00000600936 2314 ntBASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 AC091799.1-201ENST00000422823 811 ntBASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 AC231657.2-201ENST00000624556 255 ntBASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ARHGEF38Q9NXL2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF38Q9NXL2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF38Q9NXL2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF38Q9NXL2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF38Q9NXL2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.52■■□□□ 1.04
ARHGEF38Q9NXL2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.52■■□□□ 1.04
ARHGEF38Q9NXL2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.52■■□□□ 1.04
ARHGEF38Q9NXL2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.52■■□□□ 1.04
ARHGEF38Q9NXL2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF38Q9NXL2 AF106564.1-201ENST00000607058 2553 ntBASIC21.52■■□□□ 1.04
ARHGEF38Q9NXL2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.52■■□□□ 1.04
ARHGEF38Q9NXL2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ARHGEF38Q9NXL2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ARHGEF38Q9NXL2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
ARHGEF38Q9NXL2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF38Q9NXL2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms